Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL359212.1-201ENST00000556608 614 ntBASIC3.77□□□□□ -1.81
SOX2P48431 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.77□□□□□ -1.81
SOX2P48431 MIR3934-201ENST00000579806 107 ntBASIC3.77□□□□□ -1.81
SOX2P48431 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.77□□□□□ -1.81
SOX2P48431 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.77□□□□□ -1.81
SOX2P48431 IGHV3-29-201ENST00000604817 344 ntBASIC3.77□□□□□ -1.81
SOX2P48431 AL158211.4-201ENST00000606988 584 ntBASIC3.77□□□□□ -1.81
SOX2P48431 AC008536.2-201ENST00000607284 349 ntBASIC3.77□□□□□ -1.81
SOX2P48431 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX2P48431 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX2P48431 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.77□□□□□ -1.81
SOX2P48431 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SOX2P48431 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SOX2P48431 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 RNA5SP502-201ENST00000362694 119 ntBASIC3.76□□□□□ -1.81
SOX2P48431 RNU6-1120P-201ENST00000362988 108 ntBASIC3.76□□□□□ -1.81
SOX2P48431 RNU6-534P-201ENST00000364877 106 ntBASIC3.76□□□□□ -1.81
SOX2P48431 RNU5E-4P-201ENST00000364931 120 ntBASIC3.76□□□□□ -1.81
SOX2P48431 RNU6-837P-201ENST00000391056 108 ntBASIC3.76□□□□□ -1.81
SOX2P48431 MIR298-201ENST00000401212 88 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AL645733.1-201ENST00000402250 217 ntBASIC3.76□□□□□ -1.81
SOX2P48431 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 AL353193.1-201ENST00000421444 268 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.76□□□□□ -1.81
SOX2P48431 OR4K11P-201ENST00000431829 904 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 RPL35AP22-201ENST00000436855 335 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 AC079781.2-201ENST00000446424 169 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC010655.1-201ENST00000449336 292 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC140076.1-201ENST00000449897 361 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC234775.1-201ENST00000454247 670 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AL049714.1-201ENST00000466686 347 ntBASIC3.76□□□□□ -1.81
SOX2P48431 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.76□□□□□ -1.81
SOX2P48431 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 RNU6-1281P-201ENST00000516223 105 ntBASIC3.76□□□□□ -1.81
SOX2P48431 RNU6-410P-201ENST00000517006 107 ntBASIC3.76□□□□□ -1.81
SOX2P48431 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 AC090572.1-201ENST00000519251 160 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC103783.1-201ENST00000520506 373 ntBASIC3.76□□□□□ -1.81
SOX2P48431 HMGN1P28-201ENST00000521340 364 ntBASIC3.76□□□□□ -1.81
SOX2P48431 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 AP005205.1-201ENST00000563503 508 ntBASIC3.76□□□□□ -1.81
SOX2P48431 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
SOX2P48431 MIR4737-201ENST00000583979 81 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 AC006254.3-201ENST00000603353 884 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC007621.1-201ENST00000604544 437 ntBASIC3.76□□□□□ -1.81
SOX2P48431 Z84480.1-201ENST00000605131 311 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC090948.1-201ENST00000607464 549 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AC093788.1-201ENST00000609356 927 ntBASIC3.76□□□□□ -1.81
SOX2P48431 TUG1_1.1-201ENST00000610654 145 ntBASIC3.76□□□□□ -1.81
SOX2P48431 SDR42E1P1-201ENST00000611327 477 ntBASIC3.76□□□□□ -1.81
SOX2P48431 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.76□□□□□ -1.81
SOX2P48431 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 MFSD8-242ENST00000641690 4199 ntBASIC3.76□□□□□ -1.81
SOX2P48431 AL136964.1-201ENST00000622038 2990 ntBASIC3.76□□□□□ -1.81
SOX2P48431 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.76□□□□□ -1.81
SOX2P48431 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.76□□□□□ -1.81
SOX2P48431 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SOX2P48431 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
SOX2P48431 AC010300.1-201ENST00000600671 5134 ntBASIC3.75□□□□□ -1.81
SOX2P48431 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.75□□□□□ -1.81
SOX2P48431 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SOX2P48431 CR848007.1-201ENST00000442354 1699 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AC068254.2-201ENST00000623938 3577 ntBASIC3.75□□□□□ -1.81
SOX2P48431 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SOX2P48431 RNU6-1249P-201ENST00000363237 111 ntBASIC3.75□□□□□ -1.81
SOX2P48431 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.75□□□□□ -1.81
SOX2P48431 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SOX2P48431 RNU6-877P-201ENST00000383868 107 ntBASIC3.75□□□□□ -1.81
SOX2P48431 RNU6-432P-201ENST00000384196 109 ntBASIC3.75□□□□□ -1.81
SOX2P48431 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SOX2P48431 RNA5SP397-201ENST00000391323 118 ntBASIC3.75□□□□□ -1.81
SOX2P48431 RPS4XP8-201ENST00000402039 771 ntBASIC3.75□□□□□ -1.81
SOX2P48431 FGF7P8-201ENST00000402994 292 ntBASIC3.75□□□□□ -1.81
SOX2P48431 AMD1P2-201ENST00000412936 992 ntBASIC3.75□□□□□ -1.81
SOX2P48431 JKAMPP1-201ENST00000413804 919 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms