Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
BRCA1P38398 SNORA7.2-201ENST00000364446 145 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA1P38398 NDUFB4P5-201ENST00000415445 361 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.9□□□□□ -1.95
BRCA1P38398 RPL7P53-201ENST00000421245 739 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AC241520.1-201ENST00000422654 1099 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AC010881.1-201ENST00000433830 235 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AL138799.3-201ENST00000438968 350 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 HMGB3P15-201ENST00000507326 574 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 MTCYBP37-201ENST00000510642 1133 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AC027338.1-201ENST00000514840 825 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 OR4A45P-201ENST00000529954 901 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 AC107954.1-201ENST00000565906 727 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.9□□□□□ -1.95
BRCA1P38398 AC135628.1-201ENST00000568867 534 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 AC074051.3-201ENST00000570238 358 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 MIR3690-201ENST00000580266 75 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.9□□□□□ -1.95
BRCA1P38398 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 AL356118.1-201ENST00000635272 1078 ntBASIC2.9□□□□□ -1.95
BRCA1P38398 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
BRCA1P38398 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
BRCA1P38398 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
BRCA1P38398 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
BRCA1P38398 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
BRCA1P38398 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 NPM1P10-201ENST00000398310 865 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 AL121972.1-201ENST00000402023 252 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 ARL2BPP3-201ENST00000421226 480 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 Z82205.1-201ENST00000428456 297 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 MTND5P27-201ENST00000428871 1720 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 MTND1P33-201ENST00000446251 917 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.89□□□□□ -1.95
BRCA1P38398 GAPDHP27-201ENST00000447427 1020 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 KLRA1P-201ENST00000503499 986 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 AC026464.5-201ENST00000562497 722 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 AC090616.5-202ENST00000582111 297 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.89□□□□□ -1.95
BRCA1P38398 VIS1.1-201ENST00000610517 203 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 AC012531.5-201ENST00000611375 151 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 MIR1291-201ENST00000627649 87 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 AL512643.1-201ENST00000635735 524 ntBASIC2.89□□□□□ -1.95
BRCA1P38398 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.89□□□□□ -1.95
BRCA1P38398 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
BRCA1P38398 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA1P38398 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BRCA1P38398 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA1P38398 RNA5SP88-201ENST00000365560 109 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.88□□□□□ -1.95
BRCA1P38398 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 LINC00888-204ENST00000487386 421 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 RN7SL283P-201ENST00000489055 303 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.88□□□□□ -1.95
BRCA1P38398 AK6P1-201ENST00000540219 478 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
BRCA1P38398 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.88□□□□□ -1.95
BRCA1P38398 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 VN1R88P-201ENST00000596787 292 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AC090425.2-201ENST00000608818 501 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.88□□□□□ -1.95
BRCA1P38398 Z99496.1-201ENST00000469424 1477 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 RNU6-321P-201ENST00000410912 106 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 ATG3P1-201ENST00000419507 911 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 AC093151.1-201ENST00000427711 313 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 MTATP6P11-201ENST00000428071 670 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 HMGB1P45-201ENST00000435986 653 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 RPL23AP42-201ENST00000471152 471 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.88□□□□□ -1.95
BRCA1P38398 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA1P38398 RNA5SP76-201ENST00000516277 87 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 CKS1BP7-201ENST00000522230 235 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
BRCA1P38398 AC061975.8-201ENST00000587058 721 ntBASIC2.88□□□□□ -1.95
BRCA1P38398 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.88□□□□□ -1.95
BRCA1P38398 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms