Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU4-1-201ENST00000363925 141 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU6-1090P-201ENST00000364065 94 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU6-108P-201ENST00000365558 107 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU1-39P-201ENST00000383897 165 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 Y_RNA.409-201ENST00000383990 98 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU6-339P-201ENST00000384310 107 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 CYCSP10-201ENST00000417973 294 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 ZNF90P2-204ENST00000419323 1075 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC006548.1-201ENST00000427470 102 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC6A4P31645 HMGB3P12-201ENST00000438745 556 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 ABCF2P2-201ENST00000450549 296 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 snoU109.4-201ENST00000458953 143 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC012158.1-204ENST00000483430 465 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RPS27AP13-201ENST00000498403 237 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 STMN1P2-201ENST00000508435 439 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC099522.1-202ENST00000514718 367 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 MTCO1P35-201ENST00000515270 228 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 RNU6-1281P-201ENST00000516223 105 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 PTP4A1P6-201ENST00000531034 478 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC6A4P31645 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AL359212.1-201ENST00000556608 614 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 UBE2L4-201ENST00000587688 464 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AL591034.3-201ENST00000605511 685 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AL020991.1-201ENST00000612314 373 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AC063943.3-201ENST00000615562 356 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 uc_338.12-201ENST00000616344 181 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 AL158801.5-201ENST00000623123 465 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 AC019278.1-201ENST00000623516 479 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 CR381572.1-201ENST00000625098 102 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC6A4P31645 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
SLC6A4P31645 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SLC6A4P31645 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC6A4P31645 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SLC6A4P31645 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SLC6A4P31645 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC6A4P31645 AL133243.3-201ENST00000617415 3004 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SLC6A4P31645 RNU1-94P-201ENST00000362627 173 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNU6-1120P-201ENST00000362988 108 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 Y_RNA.159-201ENST00000363674 87 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNU6-483P-201ENST00000384088 108 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNU6-456P-201ENST00000384493 107 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 MT-TC-201ENST00000387405 66 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SLC6A4P31645 RPL7P60-201ENST00000397636 735 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNA5SP317-201ENST00000410176 116 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNA5SP311-201ENST00000411290 116 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 HMGN1P24-201ENST00000412282 298 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 SNRPEP10-201ENST00000420249 274 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RPS12P5-201ENST00000423449 371 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC6A4P31645 AC079781.2-201ENST00000446424 169 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AL353691.1-201ENST00000451332 387 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC6A4P31645 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 AC108059.3-201ENST00000456388 214 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC6A4P31645 RPL36AP51-201ENST00000487216 318 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AF213884.1-201ENST00000488102 463 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.36□□□□□ -1.71
SLC6A4P31645 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC6A4P31645 MTCO3P44-201ENST00000510977 541 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AC005798.1-201ENST00000513715 387 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNA5SP315-201ENST00000516340 116 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 Y_RNA.704-201ENST00000516851 102 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 SNORA20.3-201ENST00000516880 132 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 RNA5SP312-201ENST00000517068 116 ntBASIC4.36□□□□□ -1.71
SLC6A4P31645 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.36□□□□□ -1.71
SLC6A4P31645 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SLC6A4P31645 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.36□□□□□ -1.71
SLC6A4P31645 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms