Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL121871.1-201ENST00000443413 436 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC093663.1-201ENST00000497190 394 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN4P29074 AC118282.1-201ENST00000506408 765 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC006390.1-201ENST00000508068 283 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.29□□□□□ -1.88
PTPN4P29074 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 AC022690.1-201ENST00000526681 550 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 AL132857.1-201ENST00000555180 708 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 COX6CP3-201ENST00000580869 223 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 MIR4637-201ENST00000582405 84 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 MTCO2P2-201ENST00000591258 225 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 AC009220.3-201ENST00000604318 586 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC008962.1-201ENST00000605729 304 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AC106028.5-201ENST00000610332 395 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN4P29074 AC120349.2-201ENST00000625002 298 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN4P29074 U6.101-201ENST00000637707 76 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTPN4P29074 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN4P29074 ZNF807-201ENST00000328088 1707 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
PTPN4P29074 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.29□□□□□ -1.88
PTPN4P29074 AC093908.1-201ENST00000623125 8092 ntBASIC3.29□□□□□ -1.88
PTPN4P29074 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.29□□□□□ -1.88
PTPN4P29074 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTPN4P29074 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PTPN4P29074 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN4P29074 NACA3P-201ENST00000359690 648 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RNU6-560P-201ENST00000364007 108 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RNU6-657P-201ENST00000383904 107 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 ARF4P3-201ENST00000397387 509 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RNU6-1077P-201ENST00000410506 102 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
PTPN4P29074 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN4P29074 RPS3AP37-201ENST00000419176 745 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC092648.1-201ENST00000425870 423 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 MTND4LP10-201ENST00000435146 291 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 NANOGP2-201ENST00000435391 727 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.28□□□□□ -1.88
PTPN4P29074 AL589880.1-201ENST00000448271 287 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RPL39P6-201ENST00000448289 150 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 RPL36AP33-201ENST00000450395 310 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 OFD1P3Y-201ENST00000453312 783 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.28□□□□□ -1.88
PTPN4P29074 AL445669.2-201ENST00000454425 421 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC026410.2-201ENST00000460281 156 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC134050.1-201ENST00000495088 933 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN4P29074 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN4P29074 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN4P29074 AC026412.2-201ENST00000512270 1075 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.28□□□□□ -1.88
PTPN4P29074 MTND2P32-201ENST00000521584 1038 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AP001372.4-201ENST00000524889 472 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 SLC2A13P1-201ENST00000531560 322 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC005832.3-201ENST00000537929 631 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.28□□□□□ -1.88
PTPN4P29074 AC015688.2-201ENST00000584523 262 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC245036.5-201ENST00000596330 847 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 BNIP3P26-201ENST00000600827 554 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC005000.2-201ENST00000605468 310 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC106052.1-201ENST00000608029 497 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC091046.2-201ENST00000620775 665 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC023510.2-201ENST00000622162 746 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 AC090740.1-201ENST00000623193 2262 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PTPN4P29074 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
PTPN4P29074 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPN4P29074 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
PTPN4P29074 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 AC097714.1-201ENST00000511272 1647 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 SNORA51.4-201ENST00000364993 124 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN4P29074 AL136310.1-201ENST00000404926 654 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 RN7SKP111-201ENST00000410349 271 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 Z99127.3-201ENST00000448158 395 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 ZNF886P-201ENST00000450781 723 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.27□□□□□ -1.89
PTPN4P29074 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPN4P29074 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms