Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
HIST1H1DP16402 AL031601.2-202ENST00000622650 282 ntBASIC1.85□□□□□ -2.11
HIST1H1DP16402 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.85□□□□□ -2.11
HIST1H1DP16402 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
HIST1H1DP16402 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
HIST1H1DP16402 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HIST1H1DP16402 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HIST1H1DP16402 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 HMGB1P5-201ENST00000255320 642 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HIST1H1DP16402 SNORA48.2-201ENST00000390926 124 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HIST1H1DP16402 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 MRPS33P4-201ENST00000434892 317 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HIST1H1DP16402 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 BUD31P2-201ENST00000449374 300 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AL021397.1-201ENST00000451806 248 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC009127.3-201ENST00000570531 403 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 OR1M4P-201ENST00000589199 287 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 AC135507.2-201ENST00000612443 309 ntBASIC1.84□□□□□ -2.11
HIST1H1DP16402 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
HIST1H1DP16402 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HIST1H1DP16402 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
HIST1H1DP16402 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
HIST1H1DP16402 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1DP16402 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 RNU4-52P-201ENST00000384209 138 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 SNORA51.11-201ENST00000384442 131 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 MIR221-201ENST00000385135 110 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1DP16402 HMGB3P2-201ENST00000411913 584 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 COTL1P1-201ENST00000422309 375 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 RPL7P44-201ENST00000424827 742 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AL034418.1-201ENST00000448675 860 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC108938.1-201ENST00000451204 136 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC008427.1-201ENST00000503102 655 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 RNU4-29P-201ENST00000515943 174 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AP002812.4-201ENST00000532139 286 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC027176.1-201ENST00000560204 514 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC092650.2-201ENST00000619984 902 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HIST1H1DP16402 AC009902.3-201ENST00000606235 2172 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.83□□□□□ -2.12
HIST1H1DP16402 NSRP1P1-201ENST00000444067 1693 ntBASIC1.83□□□□□ -2.12
HIST1H1DP16402 AL359893.1-201ENST00000447628 1580 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HIST1H1DP16402 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AL355497.1-201ENST00000406262 551 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 MTCO3P30-201ENST00000426425 670 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AL445687.1-201ENST00000439946 251 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AL591719.1-201ENST00000444669 744 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 SNRPGP6-201ENST00000451124 220 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC233279.1-201ENST00000455300 423 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 RNU7-26P-201ENST00000458980 63 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AL135752.1-201ENST00000479477 471 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC079804.2-201ENST00000490376 200 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC234778.2-201ENST00000566241 354 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 AL009028.1-201ENST00000604895 802 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 AC135178.6-201ENST00000605314 398 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 HMGB1P24-202ENST00000615653 685 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1DP16402 CTSLP2-204ENST00000629029 392 ntBASIC1.82□□□□□ -2.12
HIST1H1DP16402 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms