Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC078785.3-201ENST00000476607 425 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 VPS26AP1-201ENST00000483197 979 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC113347.3-201ENST00000509113 148 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 MTCYBP16-201ENST00000509187 1129 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC010265.1-201ENST00000513509 211 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 RNA5SP356-201ENST00000515972 94 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 RNU6-1225P-201ENST00000516336 65 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 IGHV3-76-201ENST00000522465 295 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 COX6CP8-201ENST00000522620 226 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC024224.1-201ENST00000538284 609 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 GTF3AP2-201ENST00000557014 266 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AL132657.2-201ENST00000564417 358 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC008083.4-201ENST00000615076 444 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC092184.1-201ENST00000625042 715 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 MKKS-204ENST00000639674 192 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AL079305.1-201ENST00000623159 3008 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 AC108206.1-201ENST00000570186 4159 ntBASIC2.38□□□□□ -2.03
TRAV40A0A0B4J280 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 SNORA18.3-201ENST00000384122 132 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 SNORA51.6-201ENST00000384151 125 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 SNRPEP2-201ENST00000397592 279 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 EIF5P1-201ENST00000400019 1231 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AL121978.1-201ENST00000402778 359 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RNU2-28P-201ENST00000410457 189 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RN7SKP123-201ENST00000410732 291 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AL645937.1-202ENST00000421799 937 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC096632.1-201ENST00000427395 310 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 USP9YP24-201ENST00000434374 697 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RPS20P5-201ENST00000434808 360 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 USP9YP17-201ENST00000444617 696 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC004022.1-201ENST00000447766 1066 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 NIPA2P5-201ENST00000452282 464 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RPS20P32-201ENST00000456044 356 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC092757.1-201ENST00000467293 467 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RN7SL633P-201ENST00000488974 297 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 VN1R104P-201ENST00000505115 1009 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RNA5SP367-201ENST00000516557 118 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RNU6-1261P-201ENST00000517194 104 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 SULT1C2P1-202ENST00000562418 459 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC055876.1-202ENST00000567053 138 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AP001269.3-201ENST00000588718 329 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC024153.1-201ENST00000603103 365 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC083899.3-201ENST00000603413 594 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 DUXAP3-201ENST00000603616 594 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AL009028.1-201ENST00000604895 802 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC007619.2-201ENST00000605743 379 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC016877.3-201ENST00000606778 504 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC080013.3-201ENST00000606839 578 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC131235.4-201ENST00000609288 620 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC013470.4-201ENST00000619978 986 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC092650.2-201ENST00000619984 902 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AL512506.2-201ENST00000624472 458 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC026634.1-201ENST00000634369 198 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 MIR4496-201ENST00000635896 61 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 AC068620.4-201ENST00000636730 1182 ntBASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRAV40A0A0B4J280 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms