Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 PPIAP15-201ENST00000479662 484 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RPS3AP43-201ENST00000479743 781 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC021382.1-201ENST00000483523 359 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 SNORA74D-201ENST00000516404 141 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RNA5SP179-201ENST00000517284 121 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC106038.2-201ENST00000520706 568 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 RPL23AP87-202ENST00000573039 466 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 BNIP3P23-201ENST00000599655 511 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC104662.1-201ENST00000604448 511 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AC073346.2-201ENST00000624724 2058 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 CR383658.2-201ENST00000547576 1525 ntBASIC3.8□□□□□ -1.8
POLR1BQ9H9Y6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC006378.2-201ENST00000623178 2476 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-501P-201ENST00000364072 100 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 Y_RNA.560-201ENST00000384689 102 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC007066.1-201ENST00000392902 381 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-920P-201ENST00000410926 92 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 Z97055.1-201ENST00000419730 712 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC090960.1-201ENST00000421072 306 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MED14P1-201ENST00000430517 648 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 HMGN2P31-201ENST00000432430 273 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 Z83846.1-201ENST00000446798 265 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 UBDP1-202ENST00000457888 382 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 RPL30P9-201ENST00000465586 330 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 HMGB1P36-201ENST00000487709 576 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 HMGN1P11-201ENST00000508668 303 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC021146.1-201ENST00000511202 716 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 Y_RNA.688-201ENST00000516565 95 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 SCARNA13-201ENST00000516672 275 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 OR5D17P-201ENST00000531492 978 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC087481.2-201ENST00000565492 330 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC099489.2-201ENST00000574976 260 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MIR544B-201ENST00000582372 78 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC091167.4-201ENST00000605079 184 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC107214.2-201ENST00000608204 634 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC008443.7-201ENST00000622195 246 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 AC032011.1-201ENST00000611703 1549 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MAPK10-372ENST00000641954 3413 ntBASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
POLR1BQ9H9Y6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 RNU6-769P-201ENST00000384407 104 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 PTMAP5-201ENST00000393073 333 ntBASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.8
POLR1BQ9H9Y6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms