Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SNRPCP2-201ENST00000504370 475 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-191P-201ENST00000516295 94 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 Y_RNA.686-201ENST00000516548 134 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SKP183-201ENST00000517169 324 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AL121603.1-201ENST00000553815 142 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 FAM30C-201ENST00000561158 410 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 COX6CP16-201ENST00000603667 216 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC089999.3-201ENST00000622440 577 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC241585.2-209ENST00000638217 143 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AP003175.1-201ENST00000641383 6658 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC018529.3-201ENST00000624212 2254 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AL021877.2-201ENST00000624442 10684 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-818P-201ENST00000364837 108 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU4-11P-201ENST00000365287 132 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 OR1L6-202ENST00000373684 1044 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-142P-201ENST00000384019 107 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1248P-201ENST00000391096 64 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 HLFP1-201ENST00000402375 499 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RPSAP44-201ENST00000406712 884 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1245P-201ENST00000411130 106 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 MRPS21P5-201ENST00000417885 231 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 EBAG9P1-201ENST00000418955 543 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL17P36-201ENST00000420302 549 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL7AP25-201ENST00000423357 805 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL12P46-201ENST00000436610 195 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RPL7AP61-201ENST00000443410 636 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC016027.4-201ENST00000450866 277 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC079168.2-201ENST00000453977 416 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1211P-201ENST00000459179 105 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL57P-201ENST00000493687 290 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AL117692.1-201ENST00000494283 713 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 Y_RNA.797-201ENST00000515977 94 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1198P-201ENST00000516904 67 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 IGHVIII-25-1-201ENST00000522143 241 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 IGHV1-14-201ENST00000523391 241 ntBASIC3.3□□□□□ -1.88
KRTAP3-1Q9BYR8 AC107952.1-201ENST00000524200 376 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms