Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.32□□□□□ -1.88
USP47Q96K76 AL589826.1-201ENST00000340697 249 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 MIR21-201ENST00000362134 72 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 U8.8-201ENST00000365399 135 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 MIR525-201ENST00000384978 85 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 HSPE1P26-201ENST00000405341 275 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 RN7SKP140-201ENST00000411196 284 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.32□□□□□ -1.88
USP47Q96K76 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP47Q96K76 HMGB1P45-201ENST00000435986 653 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 AC018634.1-201ENST00000437554 401 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 RAB11AP1-201ENST00000442978 646 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 HIGD1AP2-201ENST00000446367 280 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.32□□□□□ -1.88
USP47Q96K76 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.32□□□□□ -1.88
USP47Q96K76 RNU6-202P-201ENST00000515998 96 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 RNU6-1102P-201ENST00000516149 96 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.32□□□□□ -1.88
USP47Q96K76 AC090616.5-202ENST00000582111 297 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 AL645944.1-201ENST00000603857 493 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.32□□□□□ -1.88
USP47Q96K76 AC096586.1-201ENST00000610267 561 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 AC079228.1-201ENST00000624774 1049 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 AC000367.1-201ENST00000452711 1766 ntBASIC3.32□□□□□ -1.88
USP47Q96K76 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
USP47Q96K76 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP47Q96K76 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP47Q96K76 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP47Q96K76 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP47Q96K76 SNORD114-30-201ENST00000364448 72 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP47Q96K76 VN1R42P-201ENST00000424651 344 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.31□□□□□ -1.88
USP47Q96K76 FAM103A2P-201ENST00000444122 354 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AL353705.4-201ENST00000449661 238 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AP000705.1-201ENST00000454567 350 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 KLHL2P1-201ENST00000508691 521 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 TBCAP3-201ENST00000512475 312 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.31□□□□□ -1.88
USP47Q96K76 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
USP47Q96K76 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.31□□□□□ -1.88
USP47Q96K76 LINC00557-201ENST00000563184 1279 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.31□□□□□ -1.88
USP47Q96K76 OR4G1P-201ENST00000588632 938 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.31□□□□□ -1.88
USP47Q96K76 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.31□□□□□ -1.88
USP47Q96K76 SNRPGP15-201ENST00000600149 222 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AC112503.2-201ENST00000609005 552 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 AP006248.3-201ENST00000623580 594 ntBASIC3.31□□□□□ -1.88
USP47Q96K76 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USP47Q96K76 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.31□□□□□ -1.88
USP47Q96K76 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP47Q96K76 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP47Q96K76 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.3□□□□□ -1.88
USP47Q96K76 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.3□□□□□ -1.88
USP47Q96K76 RAP1BP1-201ENST00000412709 553 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.3□□□□□ -1.88
USP47Q96K76 OR51A3P-201ENST00000413596 924 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 AC007390.1-201ENST00000415722 356 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 ATG3P1-201ENST00000419507 911 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 AL356320.1-201ENST00000429616 163 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 IFNA11P-201ENST00000446352 526 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.3□□□□□ -1.88
USP47Q96K76 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP47Q96K76 AC087879.1-201ENST00000474343 374 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 RPS27P23-201ENST00000487608 251 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
USP47Q96K76 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
USP47Q96K76 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.3□□□□□ -1.88
USP47Q96K76 RNU6-488P-201ENST00000515918 99 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 SNORA76.2-201ENST00000517095 137 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 IGKV2D-36-201ENST00000518643 226 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.3□□□□□ -1.88
USP47Q96K76 DEFB122-202ENST00000569013 197 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 AL354696.1-201ENST00000614652 497 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 U73479.1-201ENST00000618062 168 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.3□□□□□ -1.88
USP47Q96K76 AC048347.1-201ENST00000624621 427 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.3□□□□□ -1.88
USP47Q96K76 AF127577.6-201ENST00000623352 2191 ntBASIC3.3□□□□□ -1.88
USP47Q96K76 MFSD8-213ENST00000641134 1327 ntBASIC3.29□□□□□ -1.88
USP47Q96K76 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.29□□□□□ -1.88
USP47Q96K76 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP47Q96K76 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
USP47Q96K76 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.29□□□□□ -1.88
USP47Q96K76 MIR764-201ENST00000390811 85 ntBASIC3.29□□□□□ -1.88
USP47Q96K76 ATP5F1P6-201ENST00000402768 767 ntBASIC3.29□□□□□ -1.88
USP47Q96K76 MIR1250-201ENST00000408098 113 ntBASIC3.29□□□□□ -1.88
USP47Q96K76 PAICSP7-201ENST00000419829 962 ntBASIC3.29□□□□□ -1.88
USP47Q96K76 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.29□□□□□ -1.88
USP47Q96K76 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.29□□□□□ -1.88
USP47Q96K76 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.29□□□□□ -1.88
USP47Q96K76 AL500527.1-201ENST00000448532 255 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms