Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.93□□□□□ -1.78
SMARCE1Q969G3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCE1Q969G3 AL157700.1-201ENST00000561973 1432 ntBASIC3.93□□□□□ -1.78
SMARCE1Q969G3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SMARCE1Q969G3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMARCE1Q969G3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 MTND4P16-201ENST00000466108 1367 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 FRG1CP-201ENST00000358464 769 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SNORD9-201ENST00000362566 104 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 RNA5SP51-201ENST00000364750 119 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SNORD116-8-201ENST00000384365 95 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 U8.11-201ENST00000384699 133 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 U8.12-201ENST00000384701 133 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 RNY3P9-201ENST00000384727 106 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AL138880.1-201ENST00000405824 642 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC004975.1-201ENST00000428733 208 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 ARF4P2-201ENST00000430209 526 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 MTND4LP10-201ENST00000435146 291 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC007967.1-201ENST00000455422 1159 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 U8.18-201ENST00000459285 133 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 RN7SL385P-201ENST00000468873 276 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC017015.1-201ENST00000477387 286 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 RPS3AP43-201ENST00000479743 781 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 HMGB1P22-201ENST00000505315 124 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC111000.2-201ENST00000507775 550 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC005178.1-201ENST00000508392 440 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC093809.1-201ENST00000509155 340 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 MTND1P22-201ENST00000510572 951 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 NPM1P41-201ENST00000512920 831 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SNORA70.18-201ENST00000516696 98 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SETP7-201ENST00000552169 453 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC087481.2-201ENST00000565492 330 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC012435.1-202ENST00000568772 240 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC008507.1-201ENST00000587506 734 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AL109653.1-201ENST00000603091 248 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 U4.6-201ENST00000621618 127 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC078883.4-201ENST00000623218 367 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC110801.1-201ENST00000623590 212 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 AC068057.2-201ENST00000624047 895 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.92□□□□□ -1.78
SMARCE1Q969G3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SMARCE1Q969G3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 MIR320C1-201ENST00000408566 88 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 DBIP2-201ENST00000419076 262 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL445669.1-201ENST00000426743 755 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AP000907.1-201ENST00000428428 510 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 RSU1P2-202ENST00000437884 485 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 NUTF2P7-201ENST00000453086 375 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 Z82190.1-201ENST00000454534 490 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 BET1P1-201ENST00000482276 359 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 OR2A20P-203ENST00000498397 1268 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 PHBP14-201ENST00000512887 367 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC034159.1-201ENST00000513885 583 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC084824.1-201ENST00000550917 1005 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC007954.1-201ENST00000554198 494 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC109446.2-201ENST00000567872 497 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AL353997.4-201ENST00000586196 166 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC067959.1-201ENST00000604334 379 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC097468.3-201ENST00000607956 456 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 AC122133.1-201ENST00000613964 233 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SMARCE1Q969G3 MFSD8-233ENST00000641482 4860 ntBASIC3.91□□□□□ -1.78
SMARCE1Q969G3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms