Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SET-203ENST00000372688 801 ntTSL 2 BASIC5.75□□□□□ -1.49
SIX5Q8N196 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 SNORA67-201ENST00000384423 137 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 MT-TR-201ENST00000387439 65 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC009310.1-201ENST00000414414 451 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AL049745.1-201ENST00000433953 286 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC004866.2-201ENST00000438285 481 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 Z98949.2-201ENST00000440996 144 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AL389915.2-201ENST00000454576 441 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 RN7SL189P-201ENST00000468631 289 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AP000926.1-201ENST00000479573 241 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.75□□□□□ -1.49
SIX5Q8N196 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AC026979.1-201ENST00000492525 396 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.75□□□□□ -1.49
SIX5Q8N196 RN7SKP288-201ENST00000516227 268 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 RN7SKP60-201ENST00000516985 239 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 Y_RNA.721-201ENST00000517207 102 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AC113195.1-201ENST00000579952 141 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.75□□□□□ -1.49
SIX5Q8N196 AC005899.2-201ENST00000584353 90 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC007619.2-201ENST00000605743 379 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 U73479.1-201ENST00000618062 168 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC067931.1-201ENST00000624190 671 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 MIR4275-201ENST00000636486 87 ntBASIC5.75□□□□□ -1.49
SIX5Q8N196 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SIX5Q8N196 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SIX5Q8N196 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SIX5Q8N196 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.75□□□□□ -1.49
SIX5Q8N196 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.74□□□□□ -1.49
SIX5Q8N196 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SIX5Q8N196 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.74□□□□□ -1.49
SIX5Q8N196 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 RNU1-43P-201ENST00000365052 165 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 RNU1-115P-201ENST00000365329 160 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.74□□□□□ -1.49
SIX5Q8N196 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SIX5Q8N196 RNA5SP339-201ENST00000390987 122 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AC116036.1-201ENST00000412199 367 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AC092809.3-201ENST00000415453 231 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.74□□□□□ -1.49
SIX5Q8N196 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.74□□□□□ -1.49
SIX5Q8N196 OR6D1P-201ENST00000436165 939 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 MED28P3-201ENST00000444288 531 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 RNU6-953P-201ENST00000459154 107 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 RPL37P6-201ENST00000460682 294 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 SCARNA16.2-201ENST00000516520 172 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 RN7SKP234-201ENST00000517173 224 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 RNU6-840P-201ENST00000517275 65 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.74□□□□□ -1.49
SIX5Q8N196 AC009812.2-201ENST00000517657 457 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AC090151.1-201ENST00000520784 730 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 OR8R1P-201ENST00000543943 764 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 MIR4330-201ENST00000579077 105 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 FAM25E-202ENST00000608562 189 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 AL161423.1-201ENST00000613700 262 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 RNA5SP439-201ENST00000617595 124 ntBASIC5.74□□□□□ -1.49
SIX5Q8N196 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.74□□□□□ -1.49
SIX5Q8N196 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SIX5Q8N196 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.74□□□□□ -1.49
SIX5Q8N196 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
SIX5Q8N196 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX5Q8N196 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.73□□□□□ -1.49
SIX5Q8N196 LINC01963-201ENST00000562038 3148 ntBASIC5.73□□□□□ -1.49
SIX5Q8N196 AC092747.4-201ENST00000620519 1861 ntBASIC5.73□□□□□ -1.49
SIX5Q8N196 EIF2AP4-201ENST00000424793 1781 ntBASIC5.73□□□□□ -1.49
SIX5Q8N196 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.73□□□□□ -1.49
SIX5Q8N196 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.73□□□□□ -1.49
SIX5Q8N196 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX5Q8N196 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIX5Q8N196 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.73□□□□□ -1.49
SIX5Q8N196 AL672167.1-205ENST00000641112 3080 ntBASIC5.73□□□□□ -1.49
SIX5Q8N196 Y_RNA.496-201ENST00000384444 101 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms