Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 Y_RNA.576-201ENST00000384781 102 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 RNU6-293P-201ENST00000411259 106 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 TMEM183AP1-205ENST00000432739 290 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AL035551.1-201ENST00000446931 348 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AL031274.1-201ENST00000450334 232 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC006967.1-201ENST00000467608 589 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC104806.1-201ENST00000508720 308 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 SERF1AP1-201ENST00000514575 187 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 SNORA14.1-201ENST00000516113 141 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 RNU2-10P-201ENST00000516375 211 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 IGKV2-23-201ENST00000518729 323 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC026371.1-201ENST00000551867 419 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 MIR4277-201ENST00000578298 84 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 RPS29P30-201ENST00000600975 111 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 AC068769.1-201ENST00000474767 2426 ntBASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RSPO4Q2I0M5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RSPO4Q2I0M5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.43-201ENST00000362670 111 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.48-201ENST00000362710 103 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 SNORA23-201ENST00000365128 182 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AL359837.1-201ENST00000381357 287 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 SNORA57.1-201ENST00000391227 145 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RPLP0P7-201ENST00000416050 667 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AL035461.1-201ENST00000421490 332 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP25-201ENST00000430973 463 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP74-201ENST00000437246 471 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 GAPDHP25-201ENST00000447061 1001 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 MTCO3P2-201ENST00000457365 171 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RPL23AP71-201ENST00000470966 469 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AP000797.2-201ENST00000475768 606 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC096745.1-201ENST00000509945 370 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.662-201ENST00000516028 97 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RNU7-4P-201ENST00000516961 62 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AF186190.1-201ENST00000517470 480 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC034114.1-201ENST00000520293 285 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC005341.1-201ENST00000571086 708 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 MIR4643-201ENST00000577473 78 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 MIR3160-1-201ENST00000577972 85 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC024619.4-201ENST00000580924 316 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 MIR4691-201ENST00000583764 85 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC072026.1-201ENST00000605023 201 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AL391358.1-201ENST00000605342 190 ntBASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms