Protein–RNA interactions for Protein: Q05209

PTPN12, Tyrosine-protein phosphatase non-receptor type 12, humanhuman

Known RBP Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12Q05209 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.73□□□□□ -1.49
PTPN12Q05209 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN12Q05209 AC125257.1-201ENST00000560400 2930 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PTPN12Q05209 MIR369-201ENST00000362155 70 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 RNU6-254P-201ENST00000363377 107 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 Y_RNA.128-201ENST00000363391 112 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 Y_RNA.216-201ENST00000364205 93 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PTPN12Q05209 MIR559-201ENST00000385188 96 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 ENSAP1-201ENST00000392855 326 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 MIR1250-201ENST00000408098 113 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC004987.3-201ENST00000413879 771 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN12Q05209 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN12Q05209 HMGN2P27-201ENST00000427352 270 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC130509.1-201ENST00000464158 433 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC011276.1-201ENST00000469688 323 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC109327.1-201ENST00000471666 403 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN12Q05209 AC020890.1-201ENST00000491837 504 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.72□□□□□ -1.49
PTPN12Q05209 COX7A2P2-201ENST00000505291 250 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC004062.1-201ENST00000509926 645 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC105417.1-201ENST00000514691 285 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 RN7SKP277-201ENST00000516895 283 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.72□□□□□ -1.49
PTPN12Q05209 TRMT10BP1-201ENST00000519377 943 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 SUMO2P20-201ENST00000520803 283 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC128657.1-201ENST00000549459 145 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC007224.1-201ENST00000564410 144 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AC105224.1-201ENST00000587055 421 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 UBE2L4-201ENST00000587688 464 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.72□□□□□ -1.49
PTPN12Q05209 AL355812.1-201ENST00000603215 216 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 AP001330.4-201ENST00000604350 154 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 RNU6-89P-201ENST00000606519 100 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 uc_338.12-201ENST00000616344 181 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 MIR4496-201ENST00000635896 61 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.72□□□□□ -1.49
PTPN12Q05209 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
PTPN12Q05209 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.72□□□□□ -1.49
PTPN12Q05209 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PTPN12Q05209 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PTPN12Q05209 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.71□□□□□ -1.49
PTPN12Q05209 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.71□□□□□ -1.49
PTPN12Q05209 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN12Q05209 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 SNORA4.3-201ENST00000365564 137 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 RNU6-39P-201ENST00000384344 107 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 RNU6-831P-201ENST00000384548 107 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN12Q05209 RNU2-62P-201ENST00000410868 191 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN12Q05209 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 NANOGP10-201ENST00000453325 895 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN12Q05209 ISCUP1-201ENST00000454451 448 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 RNU6-559P-201ENST00000516151 98 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 OR4P1P-201ENST00000530808 1136 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 FRG2DP-202ENST00000566967 323 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN12Q05209 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN12Q05209 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN12Q05209 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.71□□□□□ -1.5
PTPN12Q05209 AC008121.3-201ENST00000618726 433 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 MTND5P42-201ENST00000637720 498 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.71□□□□□ -1.5
PTPN12Q05209 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN12Q05209 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 SAGE2P-201ENST00000420011 2126 ntBASIC5.71□□□□□ -1.5
PTPN12Q05209 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTPN12Q05209 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN12Q05209 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN12Q05209 RNU6-43P-201ENST00000384302 107 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 HSPE1P1-201ENST00000421494 318 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN12Q05209 RPL34P6-201ENST00000432390 345 ntBASIC5.7□□□□□ -1.5
PTPN12Q05209 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN12Q05209 MRPL48P1-201ENST00000445390 636 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms