Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MIR607-201ENST00000385241 96 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 MIR16-1-201ENST00000385271 89 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CXCL12P48061 RPL31P1-201ENST00000398116 372 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AL355379.1-201ENST00000405542 640 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AL355615.1-201ENST00000406187 641 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.68□□□□□ -1.98
CXCL12P48061 AC009963.1-201ENST00000417265 157 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 Z98742.3-201ENST00000418637 326 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC003685.2-201ENST00000422795 395 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC005517.2-201ENST00000424673 553 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL12P48061 HMGB3P12-201ENST00000438745 556 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL12P48061 AL590399.6-201ENST00000446396 307 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 SEPT14P24-201ENST00000447236 180 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.68□□□□□ -1.98
CXCL12P48061 NF1P3-201ENST00000457709 450 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC146507.1-201ENST00000468335 354 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.68□□□□□ -1.98
CXCL12P48061 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL12P48061 AP003066.2-201ENST00000529375 555 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL12P48061 SYF2P1-201ENST00000550658 413 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC098826.3-201ENST00000603823 466 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC008759.3-201ENST00000613300 508 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 AC018926.1-201ENST00000616335 435 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.68□□□□□ -1.98
CXCL12P48061 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL12P48061 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL12P48061 AL136164.4-201ENST00000625013 2135 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 MTND5P3-201ENST00000438536 1800 ntBASIC2.68□□□□□ -1.98
CXCL12P48061 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CXCL12P48061 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL12P48061 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL12P48061 RNU6-619P-201ENST00000365146 108 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL12P48061 RNU6-1226P-201ENST00000384317 107 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RNU6-441P-201ENST00000384545 106 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 SNORA46-201ENST00000384762 135 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CXCL12P48061 RNA5SP425-201ENST00000410336 112 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RNU4-53P-201ENST00000410828 140 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC069282.1-201ENST00000411911 526 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL12P48061 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL12P48061 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL12P48061 AC013262.1-201ENST00000426710 252 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC112220.1-201ENST00000434628 355 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RPS7P2-201ENST00000435134 607 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.67□□□□□ -1.98
CXCL12P48061 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL12P48061 HSPE1P28-201ENST00000443139 211 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RPS26P56-201ENST00000444468 240 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RPS27P29-201ENST00000463110 252 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RPS29P21-201ENST00000496272 170 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC093801.2-201ENST00000503966 1050 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC016550.1-201ENST00000505348 785 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC091860.1-201ENST00000505723 432 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.67□□□□□ -1.98
CXCL12P48061 TXNP6-201ENST00000510190 310 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 RN7SKP43-201ENST00000516173 320 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC109329.2-201ENST00000519658 482 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.67□□□□□ -1.98
CXCL12P48061 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL12P48061 ZNF971P-201ENST00000562068 1249 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC090666.1-201ENST00000578241 445 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC022069.1-201ENST00000582910 658 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 OR4G1P-201ENST00000588632 938 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL12P48061 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.67□□□□□ -1.98
CXCL12P48061 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL12P48061 AC007621.1-201ENST00000604544 437 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC002487.1-201ENST00000604565 994 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL12P48061 AC253576.2-201ENST00000618815 580 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC006249.1-201ENST00000621223 471 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL12P48061 AC006927.2-201ENST00000639256 389 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 FAM35CP-201ENST00000554755 2470 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL12P48061 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL12P48061 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.67□□□□□ -1.98
CXCL12P48061 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CXCL12P48061 AL355578.1-201ENST00000607405 1328 ntBASIC2.67□□□□□ -1.98
CXCL12P48061 AL359893.1-201ENST00000447628 1580 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.66□□□□□ -1.98
CXCL12P48061 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CXCL12P48061 MTND4P34-201ENST00000572715 1371 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 SNORD62.1-201ENST00000362541 86 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 RNU5B-4P-201ENST00000363508 111 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 SAR1AP2-201ENST00000392696 594 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AL603865.2-201ENST00000401679 213 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 RNA5SP293-201ENST00000410527 113 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 RNU6-575P-201ENST00000411326 105 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 UBE2V1P9-201ENST00000414760 368 ntBASIC2.66□□□□□ -1.98
CXCL12P48061 AL135786.1-201ENST00000415892 214 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms