Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.56□□□□□ -1.84
HNF4AP41235 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC055876.1-202ENST00000567053 138 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC135628.1-201ENST00000568867 534 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.56□□□□□ -1.84
HNF4AP41235 AC040904.1-201ENST00000590850 223 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC022146.1-201ENST00000595307 847 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AL358072.1-201ENST00000604156 575 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AL158042.1-201ENST00000605338 460 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC243773.3-201ENST00000613270 256 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC008121.2-201ENST00000614647 523 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.56□□□□□ -1.84
HNF4AP41235 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AC007671.2-201ENST00000637344 619 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 AL732372.2-225ENST00000642124 456 ntBASIC3.56□□□□□ -1.84
HNF4AP41235 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HNF4AP41235 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HNF4AP41235 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HNF4AP41235 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 AL356473.1-201ENST00000406203 1408 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
HNF4AP41235 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HNF4AP41235 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 SNORA1.3-201ENST00000384676 136 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 SNORA48.8-201ENST00000391324 134 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 SKINT1L-201ENST00000401057 817 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL356967.1-201ENST00000406305 431 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 RN7SKP202-201ENST00000410439 330 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 RNA5SP38-201ENST00000410750 119 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC090960.1-201ENST00000421072 306 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 TMEM167AP1-201ENST00000423409 219 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC007742.1-201ENST00000425789 329 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 NDUFB1P1-201ENST00000435191 180 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 ELOCP26-201ENST00000436067 329 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.55□□□□□ -1.84
HNF4AP41235 HSPE1P28-201ENST00000443139 211 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 RNU7-125P-201ENST00000458760 62 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL133162.1-201ENST00000463228 453 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 AC108860.1-201ENST00000484521 383 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 TMEM251P1-201ENST00000503717 318 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 VN1R104P-201ENST00000505115 1009 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 MTND4LP22-201ENST00000508209 276 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC010265.1-201ENST00000513509 211 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 RN7SKP31-201ENST00000516354 278 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 RNU1-45P-201ENST00000517191 141 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 MTCO1P47-201ENST00000523889 1271 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC005832.3-201ENST00000537929 631 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL121576.1-201ENST00000556055 276 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.55□□□□□ -1.84
HNF4AP41235 DUXAP11-201ENST00000603858 526 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AL031281.1-201ENST00000604049 488 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 AC069304.2-201ENST00000605154 435 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 AL392048.1-201ENST00000613946 534 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
HNF4AP41235 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
HNF4AP41235 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.55□□□□□ -1.84
HNF4AP41235 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HNF4AP41235 RIOK3P1-201ENST00000418778 1528 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
HNF4AP41235 AP000526.1-201ENST00000603308 1388 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
HNF4AP41235 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
HNF4AP41235 MAPK10-362ENST00000641864 4484 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.54□□□□□ -1.84
HNF4AP41235 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HNF4AP41235 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HNF4AP41235 SNORD116-1-201ENST00000384335 95 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HNF4AP41235 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HNF4AP41235 RNU2-43P-201ENST00000410306 190 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 RN7SKP159-201ENST00000410657 292 ntBASIC3.54□□□□□ -1.84
HNF4AP41235 SSXP9-201ENST00000417503 292 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms