Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 Y_RNA.138-201ENST00000363462 102 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 Y_RNA.326-201ENST00000365176 113 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 SMIM11P1-201ENST00000369586 178 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 SNORA70.6-201ENST00000383934 134 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HOXC12P31275 AL592114.1-201ENST00000403842 483 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AL359634.1-202ENST00000404721 284 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RNU4-46P-201ENST00000410818 138 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC12P31275 GJA6P-201ENST00000415117 1042 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 USP9YP20-201ENST00000419224 558 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC12P31275 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.72□□□□□ -1.65
HOXC12P31275 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AL049745.1-201ENST00000433953 286 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC138761.5-201ENST00000433967 325 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 GAPDHP27-201ENST00000447427 1020 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 FABP5P13-201ENST00000452144 328 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RPL21P8-201ENST00000465083 535 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RN7SL197P-201ENST00000466981 299 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 BX284632.1-201ENST00000478218 541 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RPL21P103-201ENST00000479921 488 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 VN1R105P-201ENST00000486595 910 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RN7SL346P-201ENST00000491561 294 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 Y_RNA.654-201ENST00000497848 106 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC12P31275 CCDC34P1-201ENST00000507441 517 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC12P31275 HMGN1P9-201ENST00000515212 298 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 RNU6-273P-201ENST00000516937 96 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXC12P31275 AP005597.4-201ENST00000526762 229 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC093012.1-202ENST00000549403 582 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC12P31275 AC008638.3-201ENST00000603341 463 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 AL365204.3-201ENST00000612448 685 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.72□□□□□ -1.65
HOXC12P31275 AL357559.1-201ENST00000622228 274 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC12P31275 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXC12P31275 AC073869.8-201ENST00000641806 335 ntBASIC4.72□□□□□ -1.65
HOXC12P31275 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC12P31275 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HOXC12P31275 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
HOXC12P31275 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC12P31275 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC12P31275 RN7SKP185-201ENST00000362813 326 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 RNU6-1155P-201ENST00000363554 107 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 U3.12-201ENST00000364498 214 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 Y_RNA.259-201ENST00000364619 101 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC12P31275 RNU6-356P-201ENST00000384140 107 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC12P31275 MIR708-201ENST00000390708 88 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 RNA5SP339-201ENST00000390987 122 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 RNU6-837P-201ENST00000391056 108 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 RPS23P10-201ENST00000416185 486 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 SSXP9-201ENST00000417503 292 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AC093162.1-201ENST00000419682 124 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC12P31275 AL353729.1-201ENST00000425044 720 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 CYCSP43-201ENST00000438233 310 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 SNORD19B-201ENST00000459623 84 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AC116533.1-201ENST00000459748 321 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC12P31275 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXC12P31275 RNU6-864P-201ENST00000516256 108 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 Y_RNA.682-201ENST00000516457 100 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC136777.2-201ENST00000522979 358 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AP001804.3-201ENST00000525146 880 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC12P31275 RANP3-201ENST00000530970 276 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC12P31275 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC12P31275 AC008521.1-201ENST00000587471 187 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AC020910.2-201ENST00000603635 610 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 IGHV3-29-201ENST00000604817 344 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AL592436.1-201ENST00000605135 558 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 AL670379.4-201ENST00000605279 254 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 Z82243.1-201ENST00000609432 473 ntBASIC4.71□□□□□ -1.66
HOXC12P31275 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC12P31275 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms