Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.4□□□□□ -1.54
THBS1P07996 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.4□□□□□ -1.54
THBS1P07996 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.4□□□□□ -1.55
THBS1P07996 AC092747.4-201ENST00000620519 1861 ntBASIC5.4□□□□□ -1.55
THBS1P07996 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
THBS1P07996 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.4□□□□□ -1.55
THBS1P07996 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
THBS1P07996 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
THBS1P07996 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.4□□□□□ -1.55
THBS1P07996 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
THBS1P07996 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
THBS1P07996 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
THBS1P07996 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
THBS1P07996 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
THBS1P07996 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
THBS1P07996 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 ZNF299P-201ENST00000406845 1804 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC125336.1-201ENST00000508893 2827 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC020633.1-201ENST00000468439 2247 ntBASIC5.39□□□□□ -1.55
THBS1P07996 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
THBS1P07996 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
THBS1P07996 AL109941.1-201ENST00000401925 229 ntBASIC5.39□□□□□ -1.55
THBS1P07996 RPS29P13-201ENST00000402041 169 ntBASIC5.39□□□□□ -1.55
THBS1P07996 HMGN1P20-201ENST00000411849 300 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AL160275.3-201ENST00000423876 471 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.39□□□□□ -1.55
THBS1P07996 AC023141.8-201ENST00000442554 208 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.39□□□□□ -1.55
THBS1P07996 RNU6-953P-201ENST00000459154 107 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AP000797.2-201ENST00000475768 606 ntBASIC5.39□□□□□ -1.55
THBS1P07996 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC025458.1-201ENST00000506046 166 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC006499.3-201ENST00000506077 748 ntBASIC5.39□□□□□ -1.55
THBS1P07996 SEPT14P8-201ENST00000508026 178 ntBASIC5.39□□□□□ -1.55
THBS1P07996 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
THBS1P07996 AC107393.1-201ENST00000512403 346 ntBASIC5.39□□□□□ -1.55
THBS1P07996 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.39□□□□□ -1.55
THBS1P07996 IGLVIV-53-201ENST00000520107 367 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC136777.2-201ENST00000522979 358 ntBASIC5.39□□□□□ -1.55
THBS1P07996 HIGD1AP5-201ENST00000529959 259 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.39□□□□□ -1.55
THBS1P07996 AC127381.1-201ENST00000555979 939 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AMZ2P1-203ENST00000565833 850 ntBASIC5.39□□□□□ -1.55
THBS1P07996 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.39□□□□□ -1.55
THBS1P07996 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.39□□□□□ -1.55
THBS1P07996 AC005344.1-201ENST00000613391 459 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AC245014.3-201ENST00000618589 347 ntBASIC5.39□□□□□ -1.55
THBS1P07996 AL136228.1-201ENST00000622221 319 ntBASIC5.39□□□□□ -1.55
THBS1P07996 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.39□□□□□ -1.55
THBS1P07996 AP001284.1-201ENST00000528393 2118 ntBASIC5.39□□□□□ -1.55
THBS1P07996 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
THBS1P07996 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.39□□□□□ -1.55
THBS1P07996 AL034546.1-201ENST00000623740 3693 ntBASIC5.38□□□□□ -1.55
THBS1P07996 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
THBS1P07996 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 AC025470.1-201ENST00000510053 2032 ntBASIC5.38□□□□□ -1.55
THBS1P07996 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 AC239868.2-201ENST00000564237 4527 ntBASIC5.38□□□□□ -1.55
THBS1P07996 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.38□□□□□ -1.55
THBS1P07996 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.38□□□□□ -1.55
THBS1P07996 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 snoU2_19.2-201ENST00000363024 80 ntBASIC5.38□□□□□ -1.55
THBS1P07996 RNU6-682P-201ENST00000363843 106 ntBASIC5.38□□□□□ -1.55
THBS1P07996 Y_RNA.439-201ENST00000384119 94 ntBASIC5.38□□□□□ -1.55
THBS1P07996 RNU6-1117P-201ENST00000384525 104 ntBASIC5.38□□□□□ -1.55
THBS1P07996 RNU11-4P-201ENST00000391149 133 ntBASIC5.38□□□□□ -1.55
THBS1P07996 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.38□□□□□ -1.55
THBS1P07996 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
THBS1P07996 CEACAMP1-201ENST00000434624 1035 ntBASIC5.38□□□□□ -1.55
THBS1P07996 AC004866.2-201ENST00000438285 481 ntBASIC5.38□□□□□ -1.55
THBS1P07996 ATP5LP2-201ENST00000440646 311 ntBASIC5.38□□□□□ -1.55
THBS1P07996 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.38□□□□□ -1.55
THBS1P07996 AC010631.1-201ENST00000474150 156 ntBASIC5.38□□□□□ -1.55
THBS1P07996 AC087190.1-201ENST00000484462 480 ntBASIC5.38□□□□□ -1.55
THBS1P07996 AC107032.1-201ENST00000485945 480 ntBASIC5.38□□□□□ -1.55
THBS1P07996 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.38□□□□□ -1.55
THBS1P07996 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.38□□□□□ -1.55
THBS1P07996 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.38□□□□□ -1.55
THBS1P07996 RNU6-27P-201ENST00000516146 107 ntBASIC5.38□□□□□ -1.55
THBS1P07996 SCARNA18.1-201ENST00000516330 83 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms