Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC009712.1-201ENST00000564938 316 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AL512347.1-201ENST00000566420 503 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.2□□□□□ -1.9
MT-ND1P03886 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.2□□□□□ -1.9
MT-ND1P03886 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AP001330.4-201ENST00000604350 154 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 AL607023.1-201ENST00000620045 248 ntBASIC3.2□□□□□ -1.9
MT-ND1P03886 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MT-ND1P03886 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
MT-ND1P03886 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC021755.1-201ENST00000559747 1447 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 MFSD8-233ENST00000641482 4860 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
MT-ND1P03886 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 SNORD9-201ENST00000362566 104 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RNU6-931P-201ENST00000363850 107 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RN7SKP227-201ENST00000364445 330 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RNA5SP51-201ENST00000364750 119 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RNU6-878P-201ENST00000384578 110 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 MIR1284-201ENST00000408337 120 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RNU2-15P-201ENST00000410692 191 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 ATP5A1P2-201ENST00000412323 255 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 FTH1P1-201ENST00000437933 532 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC092427.1-201ENST00000439177 601 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 RPL17P49-201ENST00000443728 411 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 MTCYBP3-201ENST00000445588 1137 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 RPL39P6-201ENST00000448289 150 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 RSL24D1P3-201ENST00000449255 495 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.19□□□□□ -1.9
MT-ND1P03886 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC026412.2-201ENST00000512270 1075 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
MT-ND1P03886 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.19□□□□□ -1.9
MT-ND1P03886 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 ELOCP32-201ENST00000548625 324 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC106791.2-201ENST00000604680 391 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AL133507.1-201ENST00000605269 557 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC112220.3-201ENST00000605502 502 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC006270.3-201ENST00000605967 1036 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.19□□□□□ -1.9
MT-ND1P03886 AC245297.2-201ENST00000610119 565 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.19□□□□□ -1.9
MT-ND1P03886 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.19□□□□□ -1.9
MT-ND1P03886 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.19□□□□□ -1.9
MT-ND1P03886 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MT-ND1P03886 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MT-ND1P03886 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MT-ND1P03886 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MT-ND1P03886 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
MT-ND1P03886 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.18□□□□□ -1.9
MT-ND1P03886 RN7SKP263-201ENST00000411194 309 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC109780.2-201ENST00000413467 845 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC098592.1-201ENST00000419352 333 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 USP9YP26-201ENST00000421008 661 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC079780.1-201ENST00000428259 207 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AL354941.1-201ENST00000438600 464 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 MTCYBP34-201ENST00000439552 670 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 MTCYBP11-201ENST00000447254 1109 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 BTF3P5-201ENST00000457252 467 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 RNU6-1095P-201ENST00000516148 108 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC104986.1-201ENST00000517978 436 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC007834.2-201ENST00000536310 343 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
MT-ND1P03886 OSBPL9P5-201ENST00000542581 171 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC008015.1-201ENST00000555505 465 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 FAM60BP-201ENST00000578364 658 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.18□□□□□ -1.9
MT-ND1P03886 AC020914.6-201ENST00000594327 272 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 BDH2P1-201ENST00000602288 736 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms