Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 MTND5P28-201ENST00000438005 1594 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 Y_RNA.364-201ENST00000365532 101 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM13O60858 Y_RNA.552-201ENST00000384665 112 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC006548.1-201ENST00000427470 102 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 FABP5P14-201ENST00000437273 393 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 HMGB3P11-201ENST00000440127 604 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 AP000942.1-201ENST00000463969 747 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC006512.1-201ENST00000468816 291 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC006511.1-201ENST00000470614 315 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 RPL31P50-201ENST00000471002 296 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 HMGB3P17-201ENST00000504195 649 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 HSPD1P15-201ENST00000505573 1122 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC004062.1-201ENST00000509926 645 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 RN7SKP24-201ENST00000515888 284 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 AP000827.1-201ENST00000527814 258 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM13O60858 AP001029.3-201ENST00000588063 596 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC010424.2-201ENST00000607594 443 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 AC133104.2-201ENST00000615272 193 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AC067931.1-201ENST00000624190 671 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 AL353662.3-201ENST00000625131 237 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
TRIM13O60858 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
TRIM13O60858 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM13O60858 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM13O60858 AC108751.5-201ENST00000492880 1336 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 RPL32P3-201ENST00000359025 275 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RNU6-238P-201ENST00000363313 106 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RNU4-66P-201ENST00000365199 138 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RNU4-48P-201ENST00000365559 182 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RNU6-1040P-201ENST00000383974 107 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 Y_RNA.455-201ENST00000384230 98 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 SNORA19-201ENST00000384737 128 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 SNORD96B-201ENST00000386148 79 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 SNORA17A-201ENST00000391185 133 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 SSXP10-201ENST00000402595 565 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AL078604.1-201ENST00000404609 466 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AL080315.1-201ENST00000406055 466 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 MIR548M-201ENST00000408260 86 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 AF186996.5-201ENST00000418098 904 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM13O60858 CFL1P1-202ENST00000432948 411 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AF228730.2-201ENST00000438784 848 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC092013.1-201ENST00000438795 332 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 PRPS1P1-201ENST00000445305 876 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM13O60858 AL389915.2-201ENST00000454576 441 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC011225.1-201ENST00000457751 369 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RPL5P30-201ENST00000465511 891 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 RPS15AP17-201ENST00000470598 390 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 OR2AO1P-201ENST00000476497 403 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM13O60858 RNU6-1143P-201ENST00000516125 104 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 SNORD27.1-201ENST00000516319 72 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms