Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CRYM-AS1-204ENST00000637983 556 ntBASIC3.47□□□□□ -1.85
PRKNO60260 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.47□□□□□ -1.85
PRKNO60260 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.47□□□□□ -1.85
PRKNO60260 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.47□□□□□ -1.85
PRKNO60260 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRKNO60260 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.47□□□□□ -1.85
PRKNO60260 AC073073.2-201ENST00000609827 2578 ntBASIC3.47□□□□□ -1.85
PRKNO60260 DCAF13P1-201ENST00000495256 1330 ntBASIC3.46□□□□□ -1.85
PRKNO60260 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
PRKNO60260 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
PRKNO60260 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PRKNO60260 RNU6-28P-201ENST00000362378 107 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNU6-744P-201ENST00000365557 107 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNU6-533P-201ENST00000384144 107 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNU6-1316P-201ENST00000384242 108 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
PRKNO60260 Y_RNA.599-201ENST00000410489 109 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RN7SKP56-201ENST00000410513 331 ntBASIC3.46□□□□□ -1.86
PRKNO60260 Y_RNA.619-201ENST00000410951 90 ntBASIC3.46□□□□□ -1.86
PRKNO60260 MTCO1P17-201ENST00000411522 491 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 RPL21P32-201ENST00000419877 477 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC012065.2-201ENST00000421295 375 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 MTCO2P5-201ENST00000422621 426 ntBASIC3.46□□□□□ -1.86
PRKNO60260 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 AL590233.1-201ENST00000430017 456 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
PRKNO60260 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 MTND1P34-201ENST00000438556 671 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AP000542.1-201ENST00000448473 371 ntBASIC3.46□□□□□ -1.86
PRKNO60260 PDSS1P2-201ENST00000449397 678 ntBASIC3.46□□□□□ -1.86
PRKNO60260 USP9YP12-201ENST00000450481 570 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RPS26P15-201ENST00000488067 348 ntBASIC3.46□□□□□ -1.86
PRKNO60260 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 SLC25A15P5-201ENST00000508033 253 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 AC010342.1-201ENST00000514047 877 ntBASIC3.46□□□□□ -1.86
PRKNO60260 HIGD1AP3-201ENST00000515857 278 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNU1-95P-201ENST00000516357 160 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNA5SP164-201ENST00000516533 110 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RNU1-128P-201ENST00000516704 160 ntBASIC3.46□□□□□ -1.86
PRKNO60260 RN7SKP234-201ENST00000517173 224 ntBASIC3.46□□□□□ -1.86
PRKNO60260 IGKV2D-36-201ENST00000518643 226 ntBASIC3.46□□□□□ -1.86
PRKNO60260 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.46□□□□□ -1.86
PRKNO60260 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.46□□□□□ -1.86
PRKNO60260 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKNO60260 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 ZNF415P1-201ENST00000582279 1166 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKNO60260 AC005771.1-201ENST00000585581 349 ntBASIC3.46□□□□□ -1.86
PRKNO60260 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKNO60260 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.46□□□□□ -1.86
PRKNO60260 AC073648.5-201ENST00000603502 305 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC080078.2-201ENST00000603766 501 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC004492.1-201ENST00000607036 742 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC015540.1-201ENST00000615828 501 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC073968.1-201ENST00000618594 637 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AC068792.1-201ENST00000621354 417 ntBASIC3.46□□□□□ -1.86
PRKNO60260 MIR4496-201ENST00000635896 61 ntBASIC3.46□□□□□ -1.86
PRKNO60260 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.46□□□□□ -1.86
PRKNO60260 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PRKNO60260 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRKNO60260 AC018555.1-201ENST00000567548 1980 ntBASIC3.45□□□□□ -1.86
PRKNO60260 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
PRKNO60260 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRKNO60260 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.45□□□□□ -1.86
PRKNO60260 RNU6-730P-201ENST00000383954 104 ntBASIC3.45□□□□□ -1.86
PRKNO60260 SNORA5A-201ENST00000384111 134 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms