Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX4O14627 ERHP2-201ENST00000402323 299 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX4O14627 AL008987.1-201ENST00000415528 237 ntBASIC3.09□□□□□ -1.91
CDX4O14627 HMGB1P49-201ENST00000418882 569 ntBASIC3.09□□□□□ -1.91
CDX4O14627 MTCYBP24-201ENST00000420387 1106 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 MTND5P25-201ENST00000430499 799 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 RPS6P15-201ENST00000431996 751 ntBASIC3.09□□□□□ -1.91
CDX4O14627 SETP8-201ENST00000435341 628 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.09□□□□□ -1.91
CDX4O14627 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC087312.1-201ENST00000471411 480 ntBASIC3.09□□□□□ -1.91
CDX4O14627 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
CDX4O14627 RPS26P15-201ENST00000488067 348 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC078918.1-201ENST00000498515 228 ntBASIC3.09□□□□□ -1.91
CDX4O14627 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.09□□□□□ -1.91
CDX4O14627 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX4O14627 TMEM248P1-201ENST00000510579 951 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX4O14627 RN7SKP132-201ENST00000516001 208 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC005832.3-201ENST00000537929 631 ntBASIC3.09□□□□□ -1.91
CDX4O14627 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX4O14627 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.09□□□□□ -1.91
CDX4O14627 AL132657.2-201ENST00000564417 358 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC009094.1-201ENST00000564443 426 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC138915.2-201ENST00000569776 97 ntBASIC3.09□□□□□ -1.91
CDX4O14627 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.09□□□□□ -1.91
CDX4O14627 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX4O14627 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.09□□□□□ -1.91
CDX4O14627 AC007687.1-201ENST00000602704 304 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC091946.2-201ENST00000606105 291 ntBASIC3.09□□□□□ -1.91
CDX4O14627 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC099506.2-201ENST00000623074 221 ntBASIC3.09□□□□□ -1.91
CDX4O14627 AC079416.3-201ENST00000624479 549 ntBASIC3.09□□□□□ -1.91
CDX4O14627 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDX4O14627 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDX4O14627 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.09□□□□□ -1.92
CDX4O14627 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.09□□□□□ -1.92
CDX4O14627 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
CDX4O14627 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 AL359693.1-201ENST00000614959 2407 ntBASIC3.08□□□□□ -1.92
CDX4O14627 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDX4O14627 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDX4O14627 RNU4-82P-201ENST00000362443 140 ntBASIC3.08□□□□□ -1.92
CDX4O14627 RNVU1-3-201ENST00000364313 161 ntBASIC3.08□□□□□ -1.92
CDX4O14627 RNU6-283P-201ENST00000364788 107 ntBASIC3.08□□□□□ -1.92
CDX4O14627 SNORD116.1-201ENST00000365628 92 ntBASIC3.08□□□□□ -1.92
CDX4O14627 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.08□□□□□ -1.92
CDX4O14627 MT-TC-201ENST00000387405 66 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC119751.3-201ENST00000399720 670 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AL590084.1-201ENST00000407885 387 ntBASIC3.08□□□□□ -1.92
CDX4O14627 RNU2-42P-201ENST00000410697 113 ntBASIC3.08□□□□□ -1.92
CDX4O14627 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 AC126124.2-201ENST00000413542 321 ntBASIC3.08□□□□□ -1.92
CDX4O14627 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.08□□□□□ -1.92
CDX4O14627 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.08□□□□□ -1.92
CDX4O14627 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
CDX4O14627 OR6K5P-201ENST00000447050 945 ntBASIC3.08□□□□□ -1.92
CDX4O14627 NPM1P49-201ENST00000448027 714 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 AC108938.1-201ENST00000451204 136 ntBASIC3.08□□□□□ -1.92
CDX4O14627 SLC31A1P1-201ENST00000451221 567 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC104073.1-201ENST00000451988 151 ntBASIC3.08□□□□□ -1.92
CDX4O14627 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDX4O14627 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.08□□□□□ -1.92
CDX4O14627 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 HMGN2P7-201ENST00000456186 273 ntBASIC3.08□□□□□ -1.92
CDX4O14627 NCOR1P1-202ENST00000486162 291 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.08□□□□□ -1.92
CDX4O14627 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 BTF3L4P4-201ENST00000506381 449 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 RNA5SP367-201ENST00000516557 118 ntBASIC3.08□□□□□ -1.92
CDX4O14627 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 OSBPL9P5-201ENST00000542581 171 ntBASIC3.08□□□□□ -1.92
CDX4O14627 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.08□□□□□ -1.92
CDX4O14627 AC008127.2-201ENST00000549925 1075 ntBASIC3.08□□□□□ -1.92
CDX4O14627 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
CDX4O14627 AC022662.1-201ENST00000580252 331 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC010928.3-201ENST00000587712 541 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX4O14627 AC021171.1-201ENST00000603137 706 ntBASIC3.08□□□□□ -1.92
CDX4O14627 AC013444.2-201ENST00000603317 787 ntBASIC3.08□□□□□ -1.92
CDX4O14627 RPL23AP92-201ENST00000603609 255 ntBASIC3.08□□□□□ -1.92
CDX4O14627 DPRXP5-201ENST00000604662 539 ntBASIC3.08□□□□□ -1.92
CDX4O14627 SNORD39.4-201ENST00000620099 78 ntBASIC3.08□□□□□ -1.92
CDX4O14627 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDX4O14627 AC005183.1-201ENST00000603687 1979 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms