Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC068533.2-201ENST00000411872 306 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 Z99755.1-201ENST00000414048 380 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 MTND2P5-201ENST00000432656 1006 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AL606517.1-201ENST00000446914 387 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC073387.1-201ENST00000453261 709 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 snoU13.4-201ENST00000458916 104 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 MTND1P16-201ENST00000465177 898 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM1O00151 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM1O00151 MTCYBP17-201ENST00000503579 789 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 HMGB1P22-201ENST00000505315 124 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC006390.1-201ENST00000508068 283 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC104619.4-201ENST00000510773 249 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC116353.3-201ENST00000511215 249 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 RNU6-27P-201ENST00000516146 107 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM1O00151 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.18□□□□□ -1.9
PDLIM1O00151 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
PDLIM1O00151 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM1O00151 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 SNORD84-203ENST00000584275 78 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 RPL23AP92-201ENST00000603609 255 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 BNIP3P11-201ENST00000603878 563 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC128687.1-201ENST00000605304 619 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AC243773.3-201ENST00000613270 256 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 AC068787.1-201ENST00000623908 691 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 AC091925.2-201ENST00000625059 256 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PDLIM1O00151 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM1O00151 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM1O00151 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM1O00151 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 U3.29-201ENST00000391296 212 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 TAF9BP1-201ENST00000396646 746 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 RPL19P1-201ENST00000411635 428 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 HSPE1P1-201ENST00000421494 318 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM1O00151 PSMA6P3-201ENST00000428242 164 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC091286.1-201ENST00000431233 461 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM1O00151 MTND2P20-201ENST00000440805 661 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC006499.5-201ENST00000505037 514 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC010625.1-201ENST00000511296 403 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.17□□□□□ -1.9
PDLIM1O00151 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 GMPSP1-201ENST00000514075 579 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 RNU6-583P-201ENST00000516012 92 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 SNORA70.18-201ENST00000516696 98 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM1O00151 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
PDLIM1O00151 MIR4429-201ENST00000580105 73 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 MIR4637-201ENST00000582405 84 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.17□□□□□ -1.9
PDLIM1O00151 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.17□□□□□ -1.9
PDLIM1O00151 AC131235.4-201ENST00000609288 620 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 VIS1.1-201ENST00000610517 203 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC107075.1-201ENST00000613695 314 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AL050303.3-201ENST00000613704 284 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 AC116618.1-201ENST00000634617 774 ntBASIC3.17□□□□□ -1.9
PDLIM1O00151 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDLIM1O00151 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM1O00151 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 Y_RNA.192-201ENST00000363977 102 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AL359837.1-201ENST00000381357 287 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PDLIM1O00151 SSR1P2-201ENST00000415208 787 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 TIMM9P2-201ENST00000419324 266 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM1O00151 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms