Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-398P-201ENST00000384143 109 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-790P-201ENST00000384479 105 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 MIR135A2-201ENST00000384854 100 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 MIR625-201ENST00000385047 85 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SNORD73A-201ENST00000386062 65 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL163193.1-201ENST00000444895 788 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RPS3AP46-201ENST00000448352 682 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 OR2AQ1P-201ENST00000451972 200 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SL57P-201ENST00000493687 290 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-397P-201ENST00000516226 104 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-897P-201ENST00000517135 105 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC087369.1-201ENST00000520775 996 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 MIR4489-201ENST00000578869 62 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC211433.2-201ENST00000608433 387 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AC005344.1-201ENST00000613391 459 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL139099.4-201ENST00000614802 114 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AP005431.1-201ENST00000618479 319 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL159153.1-201ENST00000619688 317 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AP002512.4-202ENST00000641599 4530 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 OR13C1P-202ENST00000641378 2919 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 PARP4P2-201ENST00000446672 3326 ntBASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PCDHB11Q9Y5F2 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC109446.4-201ENST00000623235 2755 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL121886.1-201ENST00000358609 435 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 Y_RNA.20-201ENST00000362479 113 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RNU1-150P-201ENST00000362491 162 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL445529.1-201ENST00000398713 389 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RPL21P90-201ENST00000415692 466 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RAC1P3-201ENST00000416129 580 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL137014.1-201ENST00000420490 1226 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 KRT8P51-201ENST00000438938 274 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL392103.1-201ENST00000447000 198 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 Z92846.1-201ENST00000456203 268 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 TRBVB-201ENST00000477100 408 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 HIGD1AP3-201ENST00000515857 278 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 ACA59.1-201ENST00000515966 143 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 SNORA31.3-201ENST00000516029 96 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RNA5SP362-201ENST00000516048 118 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RNU6-570P-201ENST00000517051 105 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SKP258-201ENST00000517151 304 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 MIR4273-201ENST00000582824 84 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC012433.1-201ENST00000588916 398 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC010201.1-201ENST00000605051 540 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 MIR15A-201ENST00000607334 83 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC006023.2-201ENST00000609916 167 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AL031601.2-202ENST00000622650 282 ntBASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHB11Q9Y5F2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AL161756.3-201ENST00000641216 2071 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms