Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL355810.1-201ENST00000614629 552 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 AC023158.2-201ENST00000614876 543 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 RNU1-68P-201ENST00000615382 146 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RNF6Q9Y252 U1.39-201ENST00000621562 146 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 LINC02211-204ENST00000642024 1070 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RNF6Q9Y252 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF6Q9Y252 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
RNF6Q9Y252 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
RNF6Q9Y252 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 Y_RNA.111-201ENST00000363248 100 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 CYCSP45-201ENST00000402289 315 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 RSL24D1P1-201ENST00000404972 493 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AL590084.1-201ENST00000407885 387 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 SNORA11.2-201ENST00000408318 127 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 Z99755.1-201ENST00000414048 380 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 MUPP-201ENST00000438111 566 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AL589880.1-201ENST00000448271 287 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 EXOSC3P1-201ENST00000448649 500 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC092754.2-201ENST00000463506 460 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC104164.3-201ENST00000467363 1258 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 TMEM251P1-201ENST00000503717 318 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 COX7A2P2-201ENST00000505291 250 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC008837.2-201ENST00000513076 418 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 OR10V3P-201ENST00000525712 725 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC018630.1-201ENST00000541376 925 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC106782.4-201ENST00000568264 210 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 MIR8057-201ENST00000620957 69 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC004009.2-201ENST00000623016 728 ntBASIC3.11□□□□□ -1.91
RNF6Q9Y252 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RNF6Q9Y252 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF6Q9Y252 AC091152.2-201ENST00000591628 2569 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF6Q9Y252 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF6Q9Y252 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 RNA5SP295-201ENST00000362655 121 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF6Q9Y252 RNU6-925P-201ENST00000384629 104 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC007899.1-201ENST00000412776 775 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MTND2P5-201ENST00000432656 1006 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 NANOGP2-201ENST00000435391 727 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 Z82190.1-201ENST00000454534 490 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MTCO3P11-201ENST00000455103 774 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 SNORA59A-201ENST00000459326 152 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 SNORA31.8-201ENST00000516327 108 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC005832.3-201ENST00000537929 631 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 HIGD1AP17-201ENST00000554576 276 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 MIR4509-3-201ENST00000578671 94 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MIR4509-2-201ENST00000583920 94 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.1□□□□□ -1.91
RNF6Q9Y252 AL031176.1-201ENST00000604554 466 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 YPEL5P2-201ENST00000605553 359 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AL138478.1-201ENST00000612252 832 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MIR7112-201ENST00000616126 65 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 MIR4509-1-201ENST00000618224 94 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AL121895.2-201ENST00000619558 447 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC022306.3-201ENST00000619930 550 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 PLCE1P1-201ENST00000622094 305 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 AC010608.3-201ENST00000625048 527 ntBASIC3.1□□□□□ -1.91
RNF6Q9Y252 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms