Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 MIR3942-201ENST00000585264 109 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 BDH2P1-201ENST00000602288 736 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AL589674.2-201ENST00000604304 337 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 AC103705.1-201ENST00000619013 241 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 MIR4302-201ENST00000638058 60 ntBASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.58
VTI1BQ9UEU0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC100778.3-201ENST00000580060 1750 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 RNA5SP242-201ENST00000364171 118 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 RN7SKP124-201ENST00000364730 341 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 SNORA36C-201ENST00000384289 132 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 EIF4E2P1-201ENST00000393781 255 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MTCO1P39-201ENST00000426148 480 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC018644.1-201ENST00000429934 551 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC236972.2-201ENST00000434979 310 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC019185.1-201ENST00000442718 389 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MTND4P17-201ENST00000470444 350 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 RN7SL174P-201ENST00000475578 289 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 TRBVA-201ENST00000498804 316 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 Y_RNA.689-201ENST00000516589 107 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 SNORA31.20-201ENST00000517111 133 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC090136.1-201ENST00000520009 240 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MIR4472-2-201ENST00000582069 67 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC012616.1-201ENST00000600294 197 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 DPPA3P3-201ENST00000603842 430 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AL133255.1-201ENST00000606374 441 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 BX005214.3-202ENST00000619809 325 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AC132068.1-201ENST00000623805 459 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 MTND5P42-201ENST00000637720 498 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 LINC01109-201ENST00000603837 3081 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 PRO1804-201ENST00000623780 2050 ntBASIC5.2□□□□□ -1.58
VTI1BQ9UEU0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC004925.1-201ENST00000624256 2706 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 SNORA63-201ENST00000363450 132 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 U3.15-201ENST00000365398 212 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 Y_RNA.394-201ENST00000383942 103 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 CISD1P1-201ENST00000393907 327 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC097374.1-203ENST00000400783 485 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 RNA5SP111-201ENST00000411386 101 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC092809.3-201ENST00000415453 231 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AL121776.1-201ENST00000429337 372 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 RNU6-953P-201ENST00000459154 107 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC106872.2-201ENST00000494303 480 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AL136038.1-201ENST00000497246 351 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 HIGD1AP13-201ENST00000509878 289 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC008638.3-201ENST00000603341 463 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 AC009597.2-201ENST00000604659 592 ntBASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.19□□□□□ -1.58
VTI1BQ9UEU0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms