Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 FO393419.3-201ENST00000428741 282 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL590103.1-201ENST00000434488 307 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 RPL7L1P13-201ENST00000511702 739 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 TTC39CP1-201ENST00000512513 755 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 RN7SKP24-201ENST00000515888 284 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AL442163.2-201ENST00000553912 710 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 MIR6864-201ENST00000617935 70 ntBASIC2.2□□□□□ -2.06
CCDC88CQ9P219 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC88CQ9P219 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 HMGB1P11-201ENST00000413899 637 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 NPM1P11-201ENST00000417106 855 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 BX276092.3-201ENST00000424182 230 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 MTCO1P57-201ENST00000432182 261 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 ARL4AP2-201ENST00000507378 601 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 TBCAP3-201ENST00000512475 312 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 MIR3690-201ENST00000580266 75 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AC136601.2-201ENST00000604356 474 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AL512283.1-201ENST00000606756 1384 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC88CQ9P219 AL049737.1-201ENST00000413920 1403 ntBASIC2.19□□□□□ -2.06
CCDC88CQ9P219 SNORA51.2-201ENST00000364595 132 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 UBE2D3P1-201ENST00000436669 444 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 HMGB1P48-201ENST00000446155 598 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 RPL9P6-201ENST00000492764 598 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 XKRY-201ENST00000510392 1100 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 RNU6-760P-201ENST00000516078 97 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 RNU6-889P-201ENST00000517189 103 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC008676.3-201ENST00000521237 435 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC008562.1-201ENST00000521763 330 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC019159.1-201ENST00000605094 187 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AL160394.1-201ENST00000624765 724 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 Z99496.1-201ENST00000469424 1477 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 PABPC1P7-201ENST00000413177 1513 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 RNU6-253P-201ENST00000384730 105 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 MIR7-1-201ENST00000384871 110 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 MIR607-201ENST00000385241 96 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC006548.1-201ENST00000427470 102 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 HMGB1P45-201ENST00000435986 653 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC090071.1-201ENST00000507713 644 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AF279873.1-201ENST00000523393 313 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC009220.3-201ENST00000604318 586 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 CR381572.1-201ENST00000625098 102 ntBASIC2.18□□□□□ -2.06
CCDC88CQ9P219 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC88CQ9P219 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RPL19P1-201ENST00000411635 428 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 Z98742.3-201ENST00000418637 326 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC087190.1-201ENST00000484462 480 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 COX6B1P6-201ENST00000522347 255 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC023158.1-201ENST00000561632 1025 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms