Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTA1Q9NP79 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.78□□□□□ -1.64
VTA1Q9NP79 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
VTA1Q9NP79 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
VTA1Q9NP79 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 RNY1P12-201ENST00000364251 105 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 MTCO3P40-201ENST00000392516 676 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC127391.1-201ENST00000411737 98 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 VDAC1P9-201ENST00000412766 841 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 MRPS10P2-201ENST00000431226 381 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC119618.1-201ENST00000434191 222 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC003071.1-201ENST00000451219 789 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 MTCO3P20-201ENST00000454926 688 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC108059.3-201ENST00000456388 214 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 RPL23AP65-201ENST00000475608 468 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 RN7SL604P-201ENST00000492589 296 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 PTGES3P3-201ENST00000511479 482 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC103783.1-201ENST00000520506 373 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 HMGN1P28-201ENST00000521340 364 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AP001893.2-201ENST00000526949 202 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AP003072.2-201ENST00000527756 676 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 OR4P1P-201ENST00000530808 1136 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AP003034.1-201ENST00000534621 422 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 MIR3146-201ENST00000580367 79 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 MIR3118-1-201ENST00000581787 76 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC245389.1-201ENST00000605141 529 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC004908.2-201ENST00000609090 574 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AL355472.4-201ENST00000610233 626 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 AL133173.2-201ENST00000614270 90 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 AC068880.5-201ENST00000624331 290 ntBASIC4.77□□□□□ -1.65
VTA1Q9NP79 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.77□□□□□ -1.65
VTA1Q9NP79 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTA1Q9NP79 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL138713.1-201ENST00000624026 2130 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTA1Q9NP79 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTA1Q9NP79 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTA1Q9NP79 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL359837.1-201ENST00000381357 287 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 RNU11-4P-201ENST00000391149 133 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 RN7SKP285-201ENST00000410137 318 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 RN7SKP202-201ENST00000410439 330 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 MIR1911-201ENST00000410783 80 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC073464.1-201ENST00000429823 534 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 CKS1BP5-201ENST00000434172 273 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 MRPS18BP2-201ENST00000434310 759 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 RPL35AP22-201ENST00000436855 335 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 C1DP4-201ENST00000455429 424 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 VN1R105P-201ENST00000486595 910 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 FTH1P21-201ENST00000512179 511 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 CCNG2P1-201ENST00000549521 1000 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 SNORA59B-202ENST00000578183 701 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 COX6CP3-201ENST00000580869 223 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 UBE2L4-201ENST00000587688 464 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 BNIP3P33-201ENST00000598912 569 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC006254.3-201ENST00000603353 884 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL031176.1-201ENST00000604554 466 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL590282.1-201ENST00000610379 1136 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AC012150.2-201ENST00000621300 544 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL359880.1-201ENST00000621879 266 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 AL158801.5-201ENST00000623123 465 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms