Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CDT1Q9H211 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDT1Q9H211 AC135001.1-201ENST00000544546 283 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AP001004.1-201ENST00000582468 324 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 MIR4801-201ENST00000582704 82 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 MIR548AB-201ENST00000584917 84 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AC007566.2-201ENST00000603642 413 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC025588.3-201ENST00000604182 274 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 SNORA51-201ENST00000606420 132 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AC103710.4-201ENST00000609301 899 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC009237.17-201ENST00000618111 748 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC009318.4-201ENST00000620496 486 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AL160394.1-201ENST00000624765 724 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 CYP3A51P-201ENST00000633513 256 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.01□□□□□ -1.77
CDT1Q9H211 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDT1Q9H211 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4□□□□□ -1.77
CDT1Q9H211 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDT1Q9H211 RNU6-289P-201ENST00000364093 107 ntBASIC4□□□□□ -1.77
CDT1Q9H211 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
CDT1Q9H211 RNA5SP171-201ENST00000391071 115 ntBASIC4□□□□□ -1.77
CDT1Q9H211 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 RNU2-66P-201ENST00000410650 161 ntBASIC4□□□□□ -1.77
CDT1Q9H211 RNA5SP39-201ENST00000411245 120 ntBASIC4□□□□□ -1.77
CDT1Q9H211 HMGB1P11-201ENST00000413899 637 ntBASIC4□□□□□ -1.77
CDT1Q9H211 TPMTP2-201ENST00000414372 726 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC004552.1-201ENST00000419089 348 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC069157.1-201ENST00000421749 137 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC092832.1-201ENST00000422934 400 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AL365184.2-201ENST00000431139 435 ntBASIC4□□□□□ -1.77
CDT1Q9H211 NDUFB1P1-201ENST00000435191 180 ntBASIC4□□□□□ -1.77
CDT1Q9H211 MTND1P28-201ENST00000435623 950 ntBASIC4□□□□□ -1.77
CDT1Q9H211 RPL23AP74-201ENST00000437246 471 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AL356535.1-201ENST00000440335 398 ntBASIC4□□□□□ -1.77
CDT1Q9H211 MTND5P14-201ENST00000441481 1267 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4□□□□□ -1.77
CDT1Q9H211 AC005297.2-201ENST00000450430 606 ntBASIC4□□□□□ -1.77
CDT1Q9H211 CFTRP1-201ENST00000456646 183 ntBASIC4□□□□□ -1.77
CDT1Q9H211 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4□□□□□ -1.77
CDT1Q9H211 RPS26P3-201ENST00000470205 348 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC116337.2-201ENST00000477662 156 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC090543.2-201ENST00000483963 348 ntBASIC4□□□□□ -1.77
CDT1Q9H211 RPL9P33-201ENST00000484311 566 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC004057.1-201ENST00000485827 348 ntBASIC4□□□□□ -1.77
CDT1Q9H211 FAM172BP-201ENST00000487497 1089 ntBASIC4□□□□□ -1.77
CDT1Q9H211 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4□□□□□ -1.77
CDT1Q9H211 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 MTND2P33-201ENST00000506452 1031 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4□□□□□ -1.77
CDT1Q9H211 MTND5P4-201ENST00000514978 288 ntBASIC4□□□□□ -1.77
CDT1Q9H211 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 HSPA8P13-201ENST00000523715 472 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4□□□□□ -1.77
CDT1Q9H211 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4□□□□□ -1.77
CDT1Q9H211 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
CDT1Q9H211 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4□□□□□ -1.77
CDT1Q9H211 PCMTD1P2-201ENST00000565017 355 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4□□□□□ -1.77
CDT1Q9H211 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 LLPHP1-201ENST00000603571 367 ntBASIC4□□□□□ -1.77
CDT1Q9H211 BRDTP1-201ENST00000605735 677 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC105429.2-201ENST00000610567 517 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AL355073.2-201ENST00000612106 557 ntBASIC4□□□□□ -1.77
CDT1Q9H211 AC008498.1-201ENST00000613012 531 ntBASIC4□□□□□ -1.77
CDT1Q9H211 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4□□□□□ -1.77
CDT1Q9H211 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4□□□□□ -1.77
CDT1Q9H211 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDT1Q9H211 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CDT1Q9H211 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
CDT1Q9H211 GDI2P1-201ENST00000429312 1336 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDT1Q9H211 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 AC007823.1-201ENST00000569932 1566 ntBASIC3.99□□□□□ -1.77
CDT1Q9H211 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms