Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 ATP5JP1-201ENST00000431631 322 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 MTND1P33-201ENST00000446251 917 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AL353718.1-201ENST00000451028 517 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC009220.1-201ENST00000451614 275 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 RPS27P27-201ENST00000498779 255 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 MIR2116-201ENST00000517221 80 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AP000857.1-201ENST00000532151 543 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AL671309.1-201ENST00000603750 544 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC096586.1-201ENST00000610267 561 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC025594.3-201ENST00000613068 790 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 AC010338.1-201ENST00000621823 717 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 ZNF663P-202ENST00000641770 1131 ntBASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX2Q96KN3 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 RNU6-444P-201ENST00000383988 108 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 ATP5F1P6-201ENST00000402768 767 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AC009296.1-201ENST00000443146 155 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 IFNA11P-201ENST00000446352 526 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 RNU7-23P-201ENST00000459465 62 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 HMGB1P24-202ENST00000615653 685 ntBASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
PKNOX2Q96KN3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 MIR592-201ENST00000384959 97 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 RPL7P2-201ENST00000427639 268 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC073387.1-201ENST00000453261 709 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 RN7SL633P-201ENST00000488974 297 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC079804.2-201ENST00000490376 200 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 CYCSP26-201ENST00000534107 320 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC135507.1-201ENST00000607214 561 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC069200.1-201ENST00000609511 323 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AC006213.5-201ENST00000619673 288 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 AL356118.1-201ENST00000635272 1078 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 CCT4P2-201ENST00000233836 1548 ntBASIC3.24□□□□□ -1.89
PKNOX2Q96KN3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RNU6-441P-201ENST00000384545 106 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RNU4-27P-201ENST00000410889 139 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AL158050.1-201ENST00000416077 457 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 MTND4P15-201ENST00000437913 1033 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RPS26P30-201ENST00000443431 335 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 snoU109.4-201ENST00000458953 143 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RPL21P47-201ENST00000483696 477 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 RPL30P5-201ENST00000494923 336 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 NPM1P41-201ENST00000512920 831 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 HIGD1AP5-201ENST00000529959 259 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC103843.2-201ENST00000530523 682 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC095057.3-201ENST00000567102 1157 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC022069.1-201ENST00000582910 658 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 VN1R88P-201ENST00000596787 292 ntBASIC3.23□□□□□ -1.89
PKNOX2Q96KN3 MIR378J-201ENST00000611988 109 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms