Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 SPA17P1-201ENST00000416656 452 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AL109741.2-201ENST00000455561 343 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AP1S2P1-201ENST00000457344 379 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AL031183.1-201ENST00000457667 207 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC010618.1-201ENST00000469924 477 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC147055.4-201ENST00000504399 745 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC025884.1-201ENST00000556034 378 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 OR4H12P-201ENST00000556269 907 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 ACTR3BP3-201ENST00000565577 979 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC136618.2-201ENST00000575091 400 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC023575.1-201ENST00000580510 358 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC060771.1-201ENST00000582031 164 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 MIR3939-201ENST00000582614 106 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 GLUD1P4-201ENST00000590914 418 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 RNU4-89P-201ENST00000607443 133 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC092106.3-201ENST00000611308 722 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 MIR6716-201ENST00000613413 80 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 MLECP1-201ENST00000615893 709 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AC099063.3-201ENST00000642066 185 ntBASIC3.59□□□□□ -1.83
LSMEM1Q8N8F7 AL138713.1-201ENST00000624026 2130 ntBASIC3.59□□□□□ -1.84
LSMEM1Q8N8F7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.84
LSMEM1Q8N8F7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.59□□□□□ -1.84
LSMEM1Q8N8F7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LSMEM1Q8N8F7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LSMEM1Q8N8F7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RNA5SP139-201ENST00000364340 117 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RNA5SP130-201ENST00000364431 114 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RNU6-1027P-201ENST00000383998 107 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 MIR199A2-201ENST00000385289 110 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AL356095.1-201ENST00000417217 199 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 MTND2P9-201ENST00000422293 931 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AL022400.1-201ENST00000423946 935 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 UBE2FP3-201ENST00000436366 524 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 SETP11-201ENST00000473027 690 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 VN1R105P-201ENST00000486595 910 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AP000867.2-201ENST00000532468 320 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 MIR4700-201ENST00000578311 74 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC105148.1-201ENST00000604961 409 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC093838.1-201ENST00000613014 469 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 AC090132.2-201ENST00000615881 347 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 OR5H6-203ENST00000642105 978 ntBASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSMEM1Q8N8F7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 Y_RNA.18-201ENST00000362461 102 ntBASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 RNU6-799P-201ENST00000363567 107 ntBASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.57□□□□□ -1.84
LSMEM1Q8N8F7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms