Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MTCO3P11-201ENST00000455103 774 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 MTCO3P24-201ENST00000572729 782 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 SNRPGP15-201ENST00000600149 222 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 VIS1.1-201ENST00000610517 203 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC104237.2-201ENST00000612456 443 ntBASIC2.71□□□□□ -1.98
RFX7Q2KHR2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX7Q2KHR2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 AC008432.1-201ENST00000615912 1320 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RNU6-253P-201ENST00000384730 105 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RNU6-1077P-201ENST00000410506 102 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 AF274854.1-201ENST00000413236 615 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 PTP4A1P7-201ENST00000423476 514 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 MIR4496-201ENST00000635896 61 ntBASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RFX7Q2KHR2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.69□□□□□ -1.98
RFX7Q2KHR2 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 OR5H15-201ENST00000383696 930 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 SNORA48.3-201ENST00000391081 134 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 AC241520.1-201ENST00000422654 1099 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 TPMTP4-201ENST00000450749 678 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 MTND4P2-201ENST00000507767 1203 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 RNU6-991P-201ENST00000516168 107 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 RNU6-548P-201ENST00000517083 115 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 SNORD84-203ENST00000584275 78 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 AC019159.1-201ENST00000605094 187 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 AL136981.2-201ENST00000617319 734 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
RFX7Q2KHR2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 MTCO1P9-201ENST00000505577 1534 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 SNORA64-201ENST00000384674 134 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 RNU6-482P-201ENST00000391068 107 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 RPL21P66-201ENST00000426566 466 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 RPS26P56-201ENST00000444468 240 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 RANP3-201ENST00000530970 276 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC090695.1-201ENST00000561269 1222 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC245128.3-201ENST00000594721 748 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC068831.7-201ENST00000616954 363 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 AC097714.1-201ENST00000511272 1647 ntBASIC2.68□□□□□ -1.98
RFX7Q2KHR2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 MIR221-201ENST00000385135 110 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 MIR320B1-201ENST00000390209 79 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC023347.2-201ENST00000433994 462 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 SNRPEP4-201ENST00000435815 279 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 ARL5AP2-201ENST00000444698 533 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 Z96811.1-201ENST00000445880 108 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 RPL37P6-202ENST00000464216 403 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 GAPDHP39-201ENST00000481866 979 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC111000.5-201ENST00000506559 1178 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC019227.1-201ENST00000526902 510 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC234775.3-201ENST00000564612 656 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AC012182.1-201ENST00000570133 895 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 NTAN1P1-201ENST00000603150 646 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 AL512283.1-201ENST00000606756 1384 ntBASIC2.67□□□□□ -1.98
RFX7Q2KHR2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX7Q2KHR2 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
RFX7Q2KHR2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.66□□□□□ -1.98
RFX7Q2KHR2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.66□□□□□ -1.98
RFX7Q2KHR2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms