Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTND1P9-201ENST00000453775 944 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 SNORD121B-201ENST00000458838 81 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 RPL7P15-201ENST00000461190 712 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 RPL5P30-201ENST00000465511 891 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN2P57739 AC022447.1-201ENST00000515358 464 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC026403.1-201ENST00000518938 295 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 AP002963.1-201ENST00000530590 184 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN2P57739 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN2P57739 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 MIR548AB-201ENST00000584917 84 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC015813.4-201ENST00000610469 179 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC108479.2-201ENST00000617314 601 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AL356585.4-201ENST00000623078 1229 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC079597.1-201ENST00000624306 508 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN2P57739 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN2P57739 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN2P57739 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 MAPK10-253ENST00000641010 4072 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 FRG1BP-201ENST00000278882 761 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 MIR208A-201ENST00000362287 71 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 RNU6-1249P-201ENST00000363237 111 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN2P57739 U3.20-201ENST00000390909 217 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL359704.1-201ENST00000411586 781 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 SYF2P2-201ENST00000417620 583 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN2P57739 AL356583.2-201ENST00000426536 280 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN2P57739 MTND4LP10-201ENST00000435146 291 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 UBE2V1P13-201ENST00000436983 439 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN2P57739 USP9YP29-201ENST00000445112 563 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 PDSS1P2-201ENST00000449397 678 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL590365.1-201ENST00000450788 243 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC104308.1-201ENST00000454621 333 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 RPS20P32-201ENST00000456044 356 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN2P57739 snoU13.22-201ENST00000459428 104 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 ARL2BPP4-201ENST00000506854 471 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 MTCO2P32-201ENST00000514865 403 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN2P57739 AP002748.2-201ENST00000528671 348 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC022878.1-201ENST00000530684 149 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN2P57739 MIR3611-201ENST00000584484 83 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC011451.2-201ENST00000604303 598 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC112191.3-201ENST00000604371 277 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL359999.1-201ENST00000604513 294 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL049634.3-201ENST00000604968 457 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC138749.5-201ENST00000611461 208 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC122108.2-201ENST00000611946 526 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 AC010678.1-201ENST00000614118 713 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AL590099.1-201ENST00000615276 138 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC116165.2-201ENST00000616705 206 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC009509.4-201ENST00000619202 509 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC018755.4-201ENST00000619715 454 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC002550.2-201ENST00000621246 394 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 AC067931.1-201ENST00000624190 671 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN2P57739 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN2P57739 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
CLDN2P57739 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN2P57739 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN2P57739 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN2P57739 SNORA70.4-201ENST00000365509 134 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 MIR199A2-201ENST00000385289 110 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms