Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.138-201ENST00000363462 102 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 Y_RNA.167-201ENST00000363735 109 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 RNU6-190P-201ENST00000384154 102 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
GFRA1P56159 RNU6-882P-201ENST00000391025 103 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AL078599.1-201ENST00000402075 293 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.63□□□□□ -1.67
GFRA1P56159 RNA5SP111-201ENST00000411386 101 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC009238.2-201ENST00000431026 355 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC020550.1-201ENST00000447385 163 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 RN7SL826P-201ENST00000479724 288 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC012158.1-204ENST00000483430 465 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 RN7SL97P-201ENST00000486780 299 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 RN7SKP147-201ENST00000517154 244 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 AL121603.1-201ENST00000553815 142 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC006116.10-201ENST00000591836 581 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 BNIP3P22-201ENST00000593399 556 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 SDR42E1P2-201ENST00000614861 481 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AL359547.2-201ENST00000615810 418 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AL591926.8-201ENST00000616876 211 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AL445363.3-201ENST00000623080 671 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC006065.5-201ENST00000623427 349 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.63□□□□□ -1.67
GFRA1P56159 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.63□□□□□ -1.67
GFRA1P56159 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA1P56159 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
GFRA1P56159 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA1P56159 AC012618.3-205ENST00000637896 1496 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA1P56159 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.62□□□□□ -1.67
GFRA1P56159 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA1P56159 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
GFRA1P56159 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
GFRA1P56159 RNU6-1252P-201ENST00000363054 104 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 RNU6-1127P-201ENST00000384580 107 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AL109941.1-201ENST00000401925 229 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 GNG5P5-201ENST00000420444 220 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AL139396.1-201ENST00000421137 167 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.62□□□□□ -1.67
GFRA1P56159 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 RPS15AP27-201ENST00000449183 343 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 HIGD1AP13-201ENST00000509878 289 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 RN7SKP13-201ENST00000515933 244 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 RNU6-352P-201ENST00000516908 107 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 RNU6-677P-201ENST00000516914 101 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 FTH1P11-201ENST00000517577 551 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC090136.1-201ENST00000520009 240 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.62□□□□□ -1.67
GFRA1P56159 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 AC093249.1-201ENST00000567049 203 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 RPL23AP84-201ENST00000571193 464 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 MIR4646-201ENST00000580775 63 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.62□□□□□ -1.67
GFRA1P56159 AC006363.1-201ENST00000603806 463 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC104763.2-201ENST00000604179 382 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 APOOP1-201ENST00000604695 592 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AL365204.3-201ENST00000612448 685 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC004696.1-201ENST00000614345 607 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 AC090510.2-201ENST00000617465 629 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.62□□□□□ -1.67
GFRA1P56159 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
GFRA1P56159 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
GFRA1P56159 MTND4P27-201ENST00000450813 1354 ntBASIC4.62□□□□□ -1.67
GFRA1P56159 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
GFRA1P56159 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA1P56159 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
GFRA1P56159 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.62□□□□□ -1.67
GFRA1P56159 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
GFRA1P56159 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
GFRA1P56159 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GFRA1P56159 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms