Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 AC008555.7-201ENST00000605008 583 ntBASIC5.94□□□□□ -1.46
VARSP26640 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.94□□□□□ -1.46
VARSP26640 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.94□□□□□ -1.46
VARSP26640 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
VARSP26640 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VARSP26640 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VARSP26640 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 AP000756.2-201ENST00000624168 2567 ntBASIC5.93□□□□□ -1.46
VARSP26640 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VARSP26640 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 MIR411-201ENST00000362239 96 ntBASIC5.93□□□□□ -1.46
VARSP26640 RNVU1-3-201ENST00000364313 161 ntBASIC5.93□□□□□ -1.46
VARSP26640 RN7SKP292-201ENST00000365522 317 ntBASIC5.93□□□□□ -1.46
VARSP26640 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 EI24P4-201ENST00000423683 1078 ntBASIC5.93□□□□□ -1.46
VARSP26640 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.93□□□□□ -1.46
VARSP26640 RPL12P18-201ENST00000437175 325 ntBASIC5.93□□□□□ -1.46
VARSP26640 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.93□□□□□ -1.46
VARSP26640 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.93□□□□□ -1.46
VARSP26640 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.93□□□□□ -1.46
VARSP26640 RPL31P60-201ENST00000478450 367 ntBASIC5.93□□□□□ -1.46
VARSP26640 RPL12P30-201ENST00000488389 499 ntBASIC5.93□□□□□ -1.46
VARSP26640 RPL7P23-201ENST00000493874 747 ntBASIC5.93□□□□□ -1.46
VARSP26640 RPS17P5-201ENST00000498293 408 ntBASIC5.93□□□□□ -1.46
VARSP26640 SERF1AP1-201ENST00000514575 187 ntBASIC5.93□□□□□ -1.46
VARSP26640 RNU6-346P-201ENST00000516288 111 ntBASIC5.93□□□□□ -1.46
VARSP26640 RN7SKP147-201ENST00000517154 244 ntBASIC5.93□□□□□ -1.46
VARSP26640 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.93□□□□□ -1.46
VARSP26640 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.93□□□□□ -1.46
VARSP26640 MIR132-201ENST00000591554 101 ntBASIC5.93□□□□□ -1.46
VARSP26640 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.93□□□□□ -1.46
VARSP26640 AC123786.2-201ENST00000603459 275 ntBASIC5.93□□□□□ -1.46
VARSP26640 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.93□□□□□ -1.46
VARSP26640 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
VARSP26640 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
VARSP26640 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VARSP26640 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.92□□□□□ -1.46
VARSP26640 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.92□□□□□ -1.46
VARSP26640 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.92□□□□□ -1.46
VARSP26640 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.92□□□□□ -1.46
VARSP26640 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 Y_RNA.16-201ENST00000362421 102 ntBASIC5.92□□□□□ -1.46
VARSP26640 RNA5SP110-201ENST00000362638 115 ntBASIC5.92□□□□□ -1.46
VARSP26640 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VARSP26640 U3.42-201ENST00000408746 214 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC007098.1-201ENST00000420122 367 ntBASIC5.92□□□□□ -1.46
VARSP26640 VTI1BP4-201ENST00000427516 527 ntBASIC5.92□□□□□ -1.46
VARSP26640 OR4C10P-201ENST00000434991 931 ntBASIC5.92□□□□□ -1.46
VARSP26640 PNKDP1-201ENST00000435914 430 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC008264.1-201ENST00000447612 367 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC010655.1-201ENST00000449336 292 ntBASIC5.92□□□□□ -1.46
VARSP26640 PPIAP27-201ENST00000453800 265 ntBASIC5.92□□□□□ -1.46
VARSP26640 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.92□□□□□ -1.46
VARSP26640 AC067942.3-201ENST00000512025 362 ntBASIC5.92□□□□□ -1.46
VARSP26640 RNU6-861P-201ENST00000516745 106 ntBASIC5.92□□□□□ -1.46
VARSP26640 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.92□□□□□ -1.46
VARSP26640 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.92□□□□□ -1.46
VARSP26640 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.92□□□□□ -1.46
VARSP26640 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.92□□□□□ -1.46
VARSP26640 AC008521.2-201ENST00000591021 259 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC174048.1-201ENST00000603389 144 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC141002.1-201ENST00000607025 279 ntBASIC5.92□□□□□ -1.46
VARSP26640 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.92□□□□□ -1.46
VARSP26640 TUG1_2.1-201ENST00000614234 87 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC024884.1-201ENST00000620583 399 ntBASIC5.92□□□□□ -1.46
VARSP26640 AP001005.3-201ENST00000622049 129 ntBASIC5.92□□□□□ -1.46
VARSP26640 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.92□□□□□ -1.46
VARSP26640 AC073488.6-201ENST00000632293 754 ntBASIC5.92□□□□□ -1.46
VARSP26640 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
VARSP26640 AL359955.1-201ENST00000455242 3275 ntBASIC5.92□□□□□ -1.46
VARSP26640 AC116667.1-201ENST00000604855 2072 ntBASIC5.92□□□□□ -1.46
VARSP26640 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
VARSP26640 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VARSP26640 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
VARSP26640 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
VARSP26640 AC009229.4-201ENST00000623854 1947 ntBASIC5.91□□□□□ -1.46
VARSP26640 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VARSP26640 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
VARSP26640 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms