Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL70P-201ENST00000478322 302 ntBASIC7.17□□□□□ -1.26
CD44P16070 RPL23AP49-201ENST00000492925 468 ntBASIC7.17□□□□□ -1.26
CD44P16070 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.17□□□□□ -1.26
CD44P16070 Y_RNA.692-201ENST00000516627 105 ntBASIC7.17□□□□□ -1.26
CD44P16070 RNU6-453P-201ENST00000516819 85 ntBASIC7.17□□□□□ -1.26
CD44P16070 BNIP3P5-201ENST00000562290 498 ntBASIC7.17□□□□□ -1.26
CD44P16070 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.17□□□□□ -1.26
CD44P16070 AL391813.1-201ENST00000603098 260 ntBASIC7.17□□□□□ -1.26
CD44P16070 AL034351.1-201ENST00000605288 668 ntBASIC7.17□□□□□ -1.26
CD44P16070 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
CD44P16070 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC7.17□□□□□ -1.26
CD44P16070 AL596275.2-206ENST00000641957 626 ntBASIC7.17□□□□□ -1.26
CD44P16070 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.17□□□□□ -1.26
CD44P16070 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC7.17□□□□□ -1.26
CD44P16070 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CD44P16070 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CD44P16070 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CD44P16070 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 AC099654.7-201ENST00000635788 2127 ntBASIC7.16□□□□□ -1.26
CD44P16070 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 AC034229.2-201ENST00000566945 2508 ntBASIC7.16□□□□□ -1.26
CD44P16070 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.16□□□□□ -1.26
CD44P16070 MIR329-1-201ENST00000385028 80 ntBASIC7.16□□□□□ -1.26
CD44P16070 MIR15B-201ENST00000385045 98 ntBASIC7.16□□□□□ -1.26
CD44P16070 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CD44P16070 RNU6-972P-201ENST00000391208 107 ntBASIC7.16□□□□□ -1.26
CD44P16070 RNU2-22P-201ENST00000411266 212 ntBASIC7.16□□□□□ -1.26
CD44P16070 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC7.16□□□□□ -1.26
CD44P16070 AC022022.1-201ENST00000430304 178 ntBASIC7.16□□□□□ -1.26
CD44P16070 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.16□□□□□ -1.26
CD44P16070 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.16□□□□□ -1.26
CD44P16070 AC022206.1-201ENST00000495947 347 ntBASIC7.16□□□□□ -1.26
CD44P16070 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 UBL5P4-201ENST00000562584 236 ntBASIC7.16□□□□□ -1.26
CD44P16070 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.16□□□□□ -1.26
CD44P16070 NF1P5-201ENST00000588287 448 ntBASIC7.16□□□□□ -1.26
CD44P16070 DEFB117-201ENST00000602356 141 ntBASIC7.16□□□□□ -1.26
CD44P16070 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.16□□□□□ -1.26
CD44P16070 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CD44P16070 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.16□□□□□ -1.26
CD44P16070 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CD44P16070 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CD44P16070 AC073365.1-203ENST00000641055 1992 ntBASIC7.15□□□□□ -1.26
CD44P16070 MAPK10-287ENST00000641217 3037 ntBASIC7.15□□□□□ -1.26
CD44P16070 LINC01109-201ENST00000603837 3081 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC004158.1-201ENST00000564508 4319 ntBASIC7.15□□□□□ -1.26
CD44P16070 Y_RNA.244-201ENST00000364484 109 ntBASIC7.15□□□□□ -1.26
CD44P16070 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CD44P16070 RNU6-1293P-201ENST00000384077 107 ntBASIC7.15□□□□□ -1.26
CD44P16070 RNU6-1145P-201ENST00000384246 107 ntBASIC7.15□□□□□ -1.26
CD44P16070 MIR153-2-201ENST00000385225 87 ntBASIC7.15□□□□□ -1.26
CD44P16070 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CD44P16070 AL450023.1-201ENST00000450868 751 ntBASIC7.15□□□□□ -1.26
CD44P16070 RN7SL655P-201ENST00000486087 298 ntBASIC7.15□□□□□ -1.26
CD44P16070 RPS15AP34-201ENST00000487776 387 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.15□□□□□ -1.26
CD44P16070 RNU6-970P-201ENST00000516312 107 ntBASIC7.15□□□□□ -1.26
CD44P16070 RNU6-412P-201ENST00000516434 106 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC7.15□□□□□ -1.26
CD44P16070 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC7.15□□□□□ -1.26
CD44P16070 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.15□□□□□ -1.26
CD44P16070 AC005476.1-201ENST00000554427 397 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC005519.1-201ENST00000554490 601 ntBASIC7.15□□□□□ -1.26
CD44P16070 RN7SL208P-201ENST00000577964 296 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC024267.2-201ENST00000582737 417 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC233702.7-202ENST00000582941 211 ntBASIC7.15□□□□□ -1.26
CD44P16070 MIR8082-201ENST00000612488 81 ntBASIC7.15□□□□□ -1.26
CD44P16070 MIR6849-201ENST00000618543 69 ntBASIC7.15□□□□□ -1.26
CD44P16070 RNU6-156P-201ENST00000621869 107 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC005514.1-201ENST00000623521 208 ntBASIC7.15□□□□□ -1.26
CD44P16070 AC048347.1-201ENST00000624621 427 ntBASIC7.15□□□□□ -1.26
CD44P16070 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CD44P16070 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CD44P16070 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms