Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC113430.1-201ENST00000506872 718 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 OR4P1P-201ENST00000530808 1136 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC137800.2-201ENST00000574375 120 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 IGHV3-29-201ENST00000604817 344 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AL365503.1-201ENST00000605247 905 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC087241.4-201ENST00000612441 480 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 Z99129.1-201ENST00000612510 255 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC104010.1-201ENST00000616889 150 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC079597.1-201ENST00000624306 508 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 MTND5P3-201ENST00000438536 1800 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL20A1Q9P218 AC092447.7-201ENST00000422212 1621 ntBASIC4.43□□□□□ -1.7
COL20A1Q9P218 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 MTND4P5-201ENST00000435821 1374 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 RNU6-348P-201ENST00000384386 107 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AL121834.1-202ENST00000404494 277 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 MIR1251-201ENST00000408552 70 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC245052.5-201ENST00000416320 649 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 BX890604.2-201ENST00000427883 474 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AL353691.1-201ENST00000451332 387 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 MTCYBP1-201ENST00000454315 1119 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC021382.1-201ENST00000483523 359 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 RPL31P61-201ENST00000496160 376 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC006499.6-201ENST00000511169 607 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 RNU4-60P-201ENST00000517239 135 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 OR5M7P-201ENST00000526140 972 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 MIR4528-201ENST00000577763 90 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 MIR3682-201ENST00000581338 84 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC011468.4-201ENST00000603942 409 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC006566.1-201ENST00000608943 513 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC103710.1-201ENST00000610003 901 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AL589743.7-201ENST00000612637 233 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC099842.1-201ENST00000619919 596 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 AC055839.1-201ENST00000634467 498 ntBASIC4.42□□□□□ -1.7
COL20A1Q9P218 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL20A1Q9P218 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.42□□□□□ -1.7
COL20A1Q9P218 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 ZNF285B-201ENST00000561698 1767 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 RNA5SP97-201ENST00000365006 84 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL20A1Q9P218 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 U3.20-201ENST00000390909 217 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 SOD2P1-201ENST00000396543 562 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 RPS3AP3-201ENST00000411933 242 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC127526.1-201ENST00000417526 366 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 HMGB1P37-201ENST00000439613 609 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 HMGB3P9-201ENST00000441799 583 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC112653.1-201ENST00000443851 386 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC034236.1-201ENST00000469891 373 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.41□□□□□ -1.7
COL20A1Q9P218 RNU6-720P-201ENST00000516363 108 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 RNU6-201P-201ENST00000517100 61 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 DUXAP2-201ENST00000519198 589 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 AP003467.2-201ENST00000520175 319 ntBASIC4.41□□□□□ -1.7
COL20A1Q9P218 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms