Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF216Q9NWF9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF216Q9NWF9 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.34□□□□□ -1.08
RNF216Q9NWF9 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
RNF216Q9NWF9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.08
RNF216Q9NWF9 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AL513302.2-201ENST00000562313 1842 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 Y_RNA.49-201ENST00000362714 112 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 SNORD115-30-201ENST00000364117 82 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 Y_RNA.310-201ENST00000365063 113 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 Y_RNA.528-201ENST00000384575 108 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 MIR514A1-201ENST00000385133 98 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 BCRP8-201ENST00000412037 255 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 LIN28AP2-201ENST00000445283 458 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AP000705.1-201ENST00000454567 350 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 RPS23P7-201ENST00000466210 444 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 RPL35AP15-201ENST00000468042 339 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AC026421.1-201ENST00000519101 163 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 AC023245.2-201ENST00000530760 2978 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF216Q9NWF9 DDX10P2-201ENST00000417796 2614 ntBASIC8.33□□□□□ -1.08
RNF216Q9NWF9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 RNU6-978P-201ENST00000364371 103 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AL139327.1-201ENST00000382988 348 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 RNU6-788P-201ENST00000390967 104 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 RPL39P40-201ENST00000445481 146 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AP006587.5-201ENST00000532033 739 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 FKBP1AP4-201ENST00000631775 336 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 SPATA31C2-201ENST00000324915 3777 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AL359195.2-201ENST00000623657 4412 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AP005435.3-201ENST00000531260 3198 ntBASIC8.32□□□□□ -1.08
RNF216Q9NWF9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RNF216Q9NWF9 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 RNA5SP448-201ENST00000363151 111 ntBASIC8.31□□□□□ -1.08
RNF216Q9NWF9 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AC007679.3-201ENST00000434035 414 ntBASIC8.31□□□□□ -1.08
RNF216Q9NWF9 RPL21P10-201ENST00000463521 490 ntBASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 NDUFS5P2-201ENST00000484004 306 ntBASIC8.31□□□□□ -1.08
RNF216Q9NWF9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AC137627.1-201ENST00000545761 289 ntBASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.31□□□□□ -1.08
RNF216Q9NWF9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms