Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AL352979.3-201ENST00000553515 247 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC053481.3-201ENST00000577881 843 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 MIR3118-1-201ENST00000581787 76 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC005730.3-201ENST00000583067 366 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 BNIP3P9-201ENST00000603714 553 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC009994.1-201ENST00000606889 253 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AL031666.3-201ENST00000609320 1006 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AL596245.1-201ENST00000618994 362 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC099654.5-201ENST00000636479 350 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC024560.2-201ENST00000507981 1497 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC008725.1-201ENST00000605123 2263 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC4Q92889 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 RNU6-28P-201ENST00000362378 107 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 RNU5E-1-201ENST00000362477 120 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 SNORD74.4-201ENST00000364129 80 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 BTBD10P2-201ENST00000404779 676 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.91□□□□□ -1.62
ERCC4Q92889 RPL31P45-201ENST00000419532 356 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC012065.2-201ENST00000421295 375 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.91□□□□□ -1.62
ERCC4Q92889 AL136380.1-201ENST00000447970 162 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AL513533.1-201ENST00000453728 415 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 RPS20P32-201ENST00000456044 356 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 RPL21P126-201ENST00000470049 478 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AP000852.1-201ENST00000472460 573 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC093267.1-201ENST00000489176 961 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC146944.2-203ENST00000502493 354 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC139495.1-202ENST00000513164 354 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC093853.1-201ENST00000515689 483 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 Vault.3-201ENST00000516676 95 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.91□□□□□ -1.62
ERCC4Q92889 MTND1P35-201ENST00000526739 508 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 CBX3P7-201ENST00000532876 502 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.91□□□□□ -1.62
ERCC4Q92889 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.91□□□□□ -1.62
ERCC4Q92889 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.91□□□□□ -1.62
ERCC4Q92889 C8orf59P2-201ENST00000603441 271 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AL354984.3-201ENST00000604803 325 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 MIR6780A-201ENST00000615089 68 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC104260.1-201ENST00000616660 539 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC007546.1-201ENST00000619452 559 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC012150.2-201ENST00000621300 544 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 AC139792.3-201ENST00000623525 224 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
ERCC4Q92889 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.91□□□□□ -1.62
ERCC4Q92889 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ERCC4Q92889 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC4Q92889 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
ERCC4Q92889 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
ERCC4Q92889 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC4Q92889 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC4Q92889 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.91□□□□□ -1.62
ERCC4Q92889 MAPK10-253ENST00000641010 4072 ntBASIC4.91□□□□□ -1.62
ERCC4Q92889 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ERCC4Q92889 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC4Q92889 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.9□□□□□ -1.62
ERCC4Q92889 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC4Q92889 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC4Q92889 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC4Q92889 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ERCC4Q92889 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ERCC4Q92889 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.9□□□□□ -1.63
ERCC4Q92889 RNU1-39P-201ENST00000383897 165 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 Y_RNA.481-201ENST00000384373 102 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 RNA5SP397-201ENST00000391323 118 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 CYB5AP4-201ENST00000396692 399 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 GLULP6-201ENST00000399502 913 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 MIR298-201ENST00000401212 88 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL049693.1-201ENST00000402760 611 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL359704.1-201ENST00000411586 781 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 NUP35P2-201ENST00000416748 943 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AC245054.1-201ENST00000420944 258 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.9□□□□□ -1.63
ERCC4Q92889 OR51AB1P-201ENST00000429046 620 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 EZH2P1-201ENST00000431167 291 ntBASIC4.9□□□□□ -1.63
ERCC4Q92889 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms