Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC024224.1-201ENST00000538284 609 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AL031176.1-201ENST00000604554 466 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AL512329.2-201ENST00000607350 548 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 MIR6839-201ENST00000620425 113 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 SDR42E1P4-201ENST00000620894 481 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC004158.1-201ENST00000564508 4319 ntBASIC4.84□□□□□ -1.64
ATG4DQ86TL0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.84□□□□□ -1.64
ATG4DQ86TL0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.84□□□□□ -1.64
ATG4DQ86TL0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ATG4DQ86TL0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.84□□□□□ -1.64
ATG4DQ86TL0 ZNF72P-201ENST00000425869 1908 ntBASIC4.84□□□□□ -1.64
ATG4DQ86TL0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 OR56A5-201ENST00000340110 738 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RNU6-1159P-201ENST00000362933 107 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RNU6-97P-201ENST00000363387 104 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RN7SKP153-201ENST00000365026 316 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RNU6-441P-201ENST00000384545 106 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.576-201ENST00000384781 102 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 MIR649-201ENST00000384843 97 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 MIR19A-201ENST00000384878 82 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC009804.1-201ENST00000400949 179 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 GJA6P-201ENST00000415117 1042 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RPL7P46-201ENST00000425129 740 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 USMG5P1-201ENST00000425964 177 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 VTI1BP4-201ENST00000427516 527 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL590233.1-201ENST00000430017 456 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL132765.1-201ENST00000434165 553 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL359672.1-201ENST00000442302 409 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RPL21P89-201ENST00000444021 467 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 NOP56P2-201ENST00000447491 769 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC104806.1-201ENST00000508720 308 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 HMGB1P40-201ENST00000525121 540 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC024619.4-201ENST00000580924 316 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 SUMO2P15-201ENST00000604285 278 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC010424.2-201ENST00000607594 443 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC000123.2-201ENST00000623124 461 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AC132825.6-201ENST00000638861 357 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.83□□□□□ -1.64
ATG4DQ86TL0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ATG4DQ86TL0 AL359854.1-201ENST00000614203 1594 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ATG4DQ86TL0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.82□□□□□ -1.64
ATG4DQ86TL0 RNU6-511P-201ENST00000363496 107 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms