| HES3 | Q5TGS1 | AC018359.1-201 | ENST00000442567 | 574 nt | TSL 4 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | HSPE1P28-201 | ENST00000443139 | 211 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL078581.2-201 | ENST00000446392 | 378 nt | TSL 3 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC099677.4-201 | ENST00000446786 | 380 nt | TSL 3 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL450344.2-201 | ENST00000455229 | 614 nt | TSL 5 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC020900.1-201 | ENST00000502568 | 565 nt | TSL 4 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC093534.2-201 | ENST00000511418 | 420 nt | TSL 3 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC008837.1-201 | ENST00000511513 | 412 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC133963.2-201 | ENST00000513686 | 578 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | LINC02364-201 | ENST00000514802 | 687 nt | TSL 2 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNU1-61P-201 | ENST00000516107 | 151 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP380-201 | ENST00000517190 | 98 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC117377.1-201 | ENST00000547633 | 1038 nt | TSL 1 (best) BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | LINC00640-203 | ENST00000556479 | 576 nt | TSL 2 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | CASC16-202 | ENST00000563844 | 610 nt | TSL 3 BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | BDH2P1-201 | ENST00000602288 | 736 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC113368.1-201 | ENST00000603736 | 382 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL390240.1-201 | ENST00000612950 | 384 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL355493.4-201 | ENST00000618530 | 292 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | ZFAT-AS1_1.1-201 | ENST00000620907 | 79 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC103798.2-201 | ENST00000624292 | 632 nt | BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RBBP8-202 | ENST00000360790 | 2962 nt | TSL 1 (best) BASIC | 2.52 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC100800.1-201 | ENST00000524252 | 2054 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC004925.1-201 | ENST00000624256 | 2706 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | APOH-201 | ENST00000205948 | 1176 nt | APPRIS P1 TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | TFPI-202 | ENST00000339091 | 1088 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP27-201 | ENST00000363839 | 119 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNU6-805P-201 | ENST00000365643 | 106 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | DEFB119-202 | ENST00000376315 | 324 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MT-TC-201 | ENST00000387405 | 66 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | ATP5F1P6-201 | ENST00000402768 | 767 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP129-201 | ENST00000410276 | 118 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNU4-65P-201 | ENST00000410473 | 140 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL022329.2-201 | ENST00000413494 | 660 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | HMGB3P23-201 | ENST00000414981 | 585 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL590705.3-201 | ENST00000416066 | 474 nt | TSL 1 (best) BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | ARL2BPP3-201 | ENST00000421226 | 480 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | CR848007.2-201 | ENST00000424918 | 787 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AP000695.2-201 | ENST00000428667 | 715 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RPL36P19-201 | ENST00000430744 | 301 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | TRIM60P13-201 | ENST00000432350 | 1283 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RPS7P2-201 | ENST00000435134 | 607 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC064874.1-202 | ENST00000440101 | 287 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | FAR2P1-203 | ENST00000440931 | 187 nt | TSL 2 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL513321.1-201 | ENST00000441175 | 761 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MTND1P33-201 | ENST00000446251 | 917 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | BX248409.1-201 | ENST00000455497 | 255 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RPL21P41-201 | ENST00000459863 | 264 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | OR5H5P-201 | ENST00000503164 | 928 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP385-201 | ENST00000515947 | 110 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RN7SKP43-201 | ENST00000516173 | 320 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP320-201 | ENST00000516263 | 124 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC008632.1-202 | ENST00000518605 | 452 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | IGKV2D-36-201 | ENST00000518643 | 226 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC068657.1-201 | ENST00000520807 | 306 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC090138.1-201 | ENST00000524493 | 578 nt | TSL 4 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL353699.1-201 | ENST00000529078 | 365 nt | TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MTATP6P25-201 | ENST00000574491 | 261 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC022069.1-201 | ENST00000582910 | 658 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | VN1R88P-201 | ENST00000596787 | 292 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | DPRXP5-201 | ENST00000604662 | 539 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC090115.4-201 | ENST00000609970 | 188 nt | BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC008505.1-205 | ENST00000637847 | 703 nt | TSL 5 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AGTR1-205 | ENST00000461609 | 1545 nt | APPRIS P1 TSL 3 BASIC | 2.51 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MGAT4C-202 | ENST00000548651 | 2159 nt | APPRIS P1 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | SAGE1-201 | ENST00000324447 | 2952 nt | APPRIS P2 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | PRKG1-205 | ENST00000401604 | 5922 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | CACNB4-238 | ENST00000636901 | 7706 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RTL4-201 | ENST00000340433 | 2613 nt | APPRIS P1 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | DEFB109C-201 | ENST00000382575 | 264 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | DEFB109B-201 | ENST00000382656 | 264 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNU6-444P-201 | ENST00000383988 | 108 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | GUCA1C-202 | ENST00000393963 | 900 nt | TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP56-201 | ENST00000410277 | 118 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | TRAPPC2P4-201 | ENST00000421750 | 331 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | GTF2IP23-201 | ENST00000423746 | 351 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC096632.1-201 | ENST00000427395 | 310 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC092839.2-201 | ENST00000431130 | 377 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | RSL24D1P2-201 | ENST00000445584 | 366 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | HMGN3P1-201 | ENST00000453847 | 193 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC025181.1-201 | ENST00000477507 | 416 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | PPP2R2B-IT1-201 | ENST00000505921 | 447 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MS4A1-205 | ENST00000528313 | 928 nt | TSL 2 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | SMILR-201 | ENST00000533992 | 553 nt | TSL 4 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | OR8K4P-201 | ENST00000534608 | 872 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC092470.1-201 | ENST00000546187 | 132 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC078778.1-201 | ENST00000547177 | 735 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | CKS1BP1-201 | ENST00000555221 | 240 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL669831.4-202 | ENST00000590817 | 238 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | TFG-209 | ENST00000615993 | 1244 nt | TSL 1 (best) BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | MIR1264-201 | ENST00000616374 | 69 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AC012594.1-272 | ENST00000625790 | 710 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | AL356118.1-201 | ENST00000635272 | 1078 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | FRG1DP-201 | ENST00000635586 | 771 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | FAM35CP-201 | ENST00000554755 | 2470 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| HES3 | Q5TGS1 | LINC01376-202 | ENST00000424895 | 1949 nt | TSL 2 BASIC | 2.5 | □□□□□ -2.01 | | |