Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC093331.1-201ENST00000521474 169 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 CASP1P1-201ENST00000526345 212 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC023050.2-201ENST00000544968 387 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN1BQ07699 HSPE1P7-201ENST00000604681 321 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 RNU6-88P-201ENST00000606801 100 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 MLECP1-201ENST00000615893 709 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AL607023.1-201ENST00000620045 248 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AC018816.2-201ENST00000621460 353 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 MIR7641-1-201ENST00000627518 61 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 OR4G2P-202ENST00000641004 1759 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCN1BQ07699 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AL672167.1-206ENST00000356293 943 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 RNU6-931P-201ENST00000363850 107 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 RNU6-723P-201ENST00000383973 107 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SCN1BQ07699 RNU4-6P-201ENST00000410804 122 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 RN7SKP33-201ENST00000410942 340 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 MTCO1P17-201ENST00000411522 491 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AL691449.1-201ENST00000426570 421 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 RSU1P2-202ENST00000437884 485 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC110760.3-202ENST00000515177 371 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 RNA5SP179-201ENST00000517284 121 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 MRPL49P2-201ENST00000521066 465 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AP003730.1-201ENST00000524605 285 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.34□□□□□ -1.87
SCN1BQ07699 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.34□□□□□ -1.87
SCN1BQ07699 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 AC006116.5-201ENST00000591936 559 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.34□□□□□ -1.87
SCN1BQ07699 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC106791.2-201ENST00000604680 391 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AL137849.1-201ENST00000604767 169 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AL445567.2-201ENST00000618935 498 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC027309.3-201ENST00000623419 351 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AL159972.1-201ENST00000625150 448 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 AC244258.1-201ENST00000637553 1071 ntBASIC3.34□□□□□ -1.87
SCN1BQ07699 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.34□□□□□ -1.87
SCN1BQ07699 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SCN1BQ07699 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SCN1BQ07699 RPL21P132-201ENST00000331267 462 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 RNA5SP399-201ENST00000364003 117 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 SNORA36C-201ENST00000384289 132 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 MIR514A1-201ENST00000385133 98 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 U3.20-201ENST00000390909 217 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 RPL22P18-201ENST00000417197 377 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC008850.1-201ENST00000427546 362 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.33□□□□□ -1.88
SCN1BQ07699 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.33□□□□□ -1.88
SCN1BQ07699 RPL32P34-201ENST00000486380 400 ntBASIC3.33□□□□□ -1.88
SCN1BQ07699 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.33□□□□□ -1.88
SCN1BQ07699 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.33□□□□□ -1.88
SCN1BQ07699 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms