Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
TOP2BQ02880 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TOP2BQ02880 MIR613-201ENST00000385248 95 ntBASIC3.32□□□□□ -1.88
TOP2BQ02880 RPS15AP12-201ENST00000419498 388 ntBASIC3.32□□□□□ -1.88
TOP2BQ02880 AL138785.1-201ENST00000425821 331 ntBASIC3.32□□□□□ -1.88
TOP2BQ02880 ATP5F1P1-201ENST00000433775 569 ntBASIC3.32□□□□□ -1.88
TOP2BQ02880 AC140059.1-201ENST00000489238 361 ntBASIC3.32□□□□□ -1.88
TOP2BQ02880 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.32□□□□□ -1.88
TOP2BQ02880 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.31□□□□□ -1.88
TOP2BQ02880 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2BQ02880 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
TOP2BQ02880 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2BQ02880 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2BQ02880 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
TOP2BQ02880 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2BQ02880 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2BQ02880 AC019155.1-201ENST00000382242 574 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 U8.10-201ENST00000384260 133 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 AP1B1P2-201ENST00000416196 106 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP2BQ02880 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP2BQ02880 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2BQ02880 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TOP2BQ02880 RN7SKP44-201ENST00000363602 316 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 AC135999.1-201ENST00000478962 479 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 AC007182.2-201ENST00000489251 402 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 RNU6-826P-201ENST00000516827 104 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.3□□□□□ -1.88
TOP2BQ02880 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP2BQ02880 AC008126.1-201ENST00000549019 480 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 AP001005.3-201ENST00000622049 129 ntBASIC3.3□□□□□ -1.88
TOP2BQ02880 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP2BQ02880 AC093775.1-201ENST00000624154 1868 ntBASIC3.29□□□□□ -1.88
TOP2BQ02880 AC244517.1-201ENST00000606030 2086 ntBASIC3.29□□□□□ -1.88
TOP2BQ02880 SNORD6-201ENST00000365444 73 ntBASIC3.29□□□□□ -1.88
TOP2BQ02880 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP2BQ02880 AL451074.3-201ENST00000437709 472 ntBASIC3.29□□□□□ -1.88
TOP2BQ02880 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.29□□□□□ -1.88
TOP2BQ02880 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.29□□□□□ -1.88
TOP2BQ02880 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP2BQ02880 AC007536.1-201ENST00000533382 349 ntBASIC3.29□□□□□ -1.88
TOP2BQ02880 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP2BQ02880 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TOP2BQ02880 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TOP2BQ02880 MIR1276-201ENST00000408707 83 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 MTCO3P30-201ENST00000426425 670 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP2BQ02880 AC017007.3-201ENST00000479865 435 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 AC010546.1-201ENST00000569391 485 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 MIR3683-201ENST00000580847 82 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP2BQ02880 AC099778.2-201ENST00000610904 211 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 AC091953.2-201ENST00000623979 160 ntBASIC3.28□□□□□ -1.88
TOP2BQ02880 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TOP2BQ02880 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
TOP2BQ02880 RNU6-661P-201ENST00000362409 107 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 RPL39P40-201ENST00000445481 146 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 AC009237.8-201ENST00000445492 379 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.27□□□□□ -1.89
TOP2BQ02880 AC011611.5-201ENST00000552477 578 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.27□□□□□ -1.89
TOP2BQ02880 AP000787.2-201ENST00000604432 568 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 AL627309.6-201ENST00000606857 840 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP2BQ02880 AL353746.1-201ENST00000566293 6881 ntBASIC3.27□□□□□ -1.89
TOP2BQ02880 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TOP2BQ02880 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TOP2BQ02880 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP2BQ02880 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.26□□□□□ -1.89
TOP2BQ02880 RPL34P26-201ENST00000445636 354 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 AL645939.1-201ENST00000453429 797 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.26□□□□□ -1.89
TOP2BQ02880 AL356575.1-201ENST00000603008 283 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 SNRPGP19-201ENST00000603826 189 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.26□□□□□ -1.89
TOP2BQ02880 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2BQ02880 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2BQ02880 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.26□□□□□ -1.89
TOP2BQ02880 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2BQ02880 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.26□□□□□ -1.89
TOP2BQ02880 GZMAP1-201ENST00000503054 631 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 HMGB3P15-201ENST00000507326 574 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.26□□□□□ -1.89
TOP2BQ02880 HMGB3P26-201ENST00000560051 582 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 ABI1P1-201ENST00000603375 1120 ntBASIC3.26□□□□□ -1.89
TOP2BQ02880 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP2BQ02880 AC104435.1-201ENST00000483483 166 ntBASIC3.25□□□□□ -1.89
TOP2BQ02880 TTC39CP1-201ENST00000512513 755 ntBASIC3.25□□□□□ -1.89
TOP2BQ02880 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP2BQ02880 RNA5SP182-201ENST00000516064 82 ntBASIC3.25□□□□□ -1.89
TOP2BQ02880 AL356280.1-201ENST00000603614 379 ntBASIC3.25□□□□□ -1.89
TOP2BQ02880 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.25□□□□□ -1.89
TOP2BQ02880 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TOP2BQ02880 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TOP2BQ02880 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP2BQ02880 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms