Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTND1P28-201ENST00000435623 950 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC091862.1-201ENST00000438016 1100 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 FAM103A2P-201ENST00000444122 354 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN2P57739 AP1S2P1-201ENST00000457344 379 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC021382.1-201ENST00000483523 359 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC112204.1-201ENST00000502591 103 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN2P57739 RNU6-1003P-201ENST00000517099 105 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN2P57739 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
CLDN2P57739 SETP2-201ENST00000553886 926 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 GNRHR2P1-201ENST00000555315 631 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN2P57739 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN2P57739 AC103987.3-201ENST00000582071 292 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN2P57739 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN2P57739 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN2P57739 AC022146.1-201ENST00000595307 847 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN2P57739 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 SNORA51-201ENST00000606420 132 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC092656.1-203ENST00000624134 423 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 AC244517.1-201ENST00000606030 2086 ntBASIC3.81□□□□□ -1.8
CLDN2P57739 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN2P57739 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN2P57739 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLDN2P57739 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN2P57739 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN2P57739 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 MIR449B-201ENST00000384995 97 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC006366.1-201ENST00000422002 759 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC006946.1-201ENST00000429106 328 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 USP9YP12-201ENST00000450481 570 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN2P57739 MTCO1P42-201ENST00000457379 726 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AL133162.1-201ENST00000463228 453 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN2P57739 UBE2CP3-201ENST00000502715 450 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN2P57739 AF131216.2-201ENST00000512316 564 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN2P57739 OR5M7P-201ENST00000526140 972 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN2P57739 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC022882.1-201ENST00000532142 501 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN2P57739 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC069240.1-201ENST00000548774 375 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN2P57739 MIR5697-201ENST00000578045 78 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC005771.1-201ENST00000585581 349 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 AC008739.3-201ENST00000603262 127 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC008638.3-201ENST00000603341 463 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 AC012557.2-201ENST00000605919 418 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 OR6R2P-201ENST00000609216 300 ntBASIC3.8□□□□□ -1.8
CLDN2P57739 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN2P57739 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CLDN2P57739 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLDN2P57739 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN2P57739 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN2P57739 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN2P57739 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN2P57739 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN2P57739 RNU6-533P-201ENST00000384144 107 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 RNU6-809P-201ENST00000384461 107 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 SNORD116-4-201ENST00000384733 96 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 MIR93-201ENST00000385024 80 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN2P57739 SNORD115.1-201ENST00000391109 76 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 Y_RNA.598-201ENST00000410480 95 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 RNA5SP306-201ENST00000411087 107 ntBASIC3.79□□□□□ -1.8
CLDN2P57739 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN2P57739 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN2P57739 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN2P57739 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms