Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC4P56524 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HDAC4P56524 AL390237.1-201ENST00000404226 1415 ntBASIC4.03□□□□□ -1.76
HDAC4P56524 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.03□□□□□ -1.77
HDAC4P56524 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HDAC4P56524 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC4P56524 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC4P56524 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC4P56524 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 NUP58P1-201ENST00000502546 1738 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HDAC4P56524 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HDAC4P56524 RNU6-335P-201ENST00000364563 113 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC4P56524 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 Y_RNA.436-201ENST00000384097 102 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 RPL31P1-201ENST00000398116 372 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AC012065.2-201ENST00000421295 375 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 RPL21P112-201ENST00000434403 463 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC4P56524 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AL138799.3-201ENST00000438968 350 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.02□□□□□ -1.77
HDAC4P56524 AL360221.1-201ENST00000445989 335 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 RN7SL132P-201ENST00000478131 296 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AC010460.1-201ENST00000507087 466 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AC010342.1-201ENST00000514047 877 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC4P56524 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC4P56524 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC4P56524 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC4P56524 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC4P56524 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 RN7SL703P-201ENST00000578485 302 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AC022916.3-201ENST00000592961 742 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AL606490.9-201ENST00000603331 271 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AL391497.1-201ENST00000608671 547 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 U6.98-201ENST00000637157 84 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HDAC4P56524 AL356473.1-201ENST00000406203 1408 ntBASIC4.02□□□□□ -1.77
HDAC4P56524 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC4P56524 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC4P56524 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 Y_RNA.201-201ENST00000364052 96 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 RNU4-24P-201ENST00000364565 139 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 RNU6-343P-201ENST00000364709 104 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC4P56524 RNU6-723P-201ENST00000383973 107 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 RNU6-878P-201ENST00000384578 110 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 PTMAP2-201ENST00000397627 327 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 MTND4LP20-201ENST00000402379 270 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 GLRXP1-201ENST00000423261 334 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.01□□□□□ -1.77
HDAC4P56524 AL589823.1-201ENST00000429577 183 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC4P56524 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 NPM1P49-201ENST00000448027 714 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC009961.3-201ENST00000449832 765 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 MTCO2P18-201ENST00000457151 658 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 snoU13.3-201ENST00000459441 104 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 OR9M1P-201ENST00000459641 921 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.01□□□□□ -1.77
HDAC4P56524 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HDAC4P56524 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC091435.1-201ENST00000505442 584 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.01□□□□□ -1.77
HDAC4P56524 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC4P56524 RPL12P22-201ENST00000519073 490 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC022861.1-201ENST00000522981 663 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.01□□□□□ -1.77
HDAC4P56524 AC008507.1-201ENST00000587506 734 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AC146944.4-201ENST00000602697 718 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AL031775.1-201ENST00000607014 887 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 AL158063.1-201ENST00000615349 536 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC4P56524 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC4P56524 AC127502.3-201ENST00000636170 1206 ntBASIC4.01□□□□□ -1.77
HDAC4P56524 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms