Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RNU6-1192P-201ENST00000612197 107 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 RNU6-489P-201ENST00000618289 107 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AL355493.4-201ENST00000618530 292 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AC018926.3-201ENST00000618841 406 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AC006111.3-201ENST00000622137 383 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AP003485.2-201ENST00000623636 610 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.35□□□□□ -2.03
COL8A2P25067 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.35□□□□□ -2.03
COL8A2P25067 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL8A2P25067 AC073055.1-201ENST00000456901 1621 ntBASIC2.35□□□□□ -2.03
COL8A2P25067 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL8A2P25067 AC011978.2-201ENST00000569835 2054 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL8A2P25067 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL8A2P25067 RNU5B-4P-201ENST00000363508 111 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RNU6-1339P-201ENST00000363574 91 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 U8.9-201ENST00000365667 134 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL8A2P25067 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
COL8A2P25067 RNU6-925P-201ENST00000384629 104 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 SNORD65C-201ENST00000390962 71 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RNU6-932P-201ENST00000391108 106 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 SNORA26.7-201ENST00000391288 122 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL138827.1-201ENST00000402666 306 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL590004.2-201ENST00000404787 371 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL138880.1-201ENST00000405824 642 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RPL31P2-201ENST00000413849 377 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 EI24P1-201ENST00000416584 867 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 AL139281.1-201ENST00000422120 335 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC008280.2-201ENST00000455473 307 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC093801.2-201ENST00000503966 1050 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC119751.4-201ENST00000507498 357 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC008885.2-201ENST00000509506 930 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC034159.1-201ENST00000513885 583 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AP001207.1-201ENST00000524051 481 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.34□□□□□ -2.03
COL8A2P25067 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 CYB5AP5-201ENST00000549779 389 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 SYF2P1-201ENST00000550658 413 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 MTCYBP28-201ENST00000566728 1132 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
COL8A2P25067 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.34□□□□□ -2.03
COL8A2P25067 AC007619.2-201ENST00000605743 379 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC090115.4-201ENST00000609970 188 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC124016.2-201ENST00000610058 665 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC069234.5-201ENST00000611056 416 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL020991.1-201ENST00000612314 373 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AL512427.1-201ENST00000618593 349 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 AC017104.5-201ENST00000637647 639 ntBASIC2.34□□□□□ -2.03
COL8A2P25067 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL8A2P25067 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL8A2P25067 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
COL8A2P25067 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.34□□□□□ -2.04
COL8A2P25067 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.34□□□□□ -2.04
COL8A2P25067 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
COL8A2P25067 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.33□□□□□ -2.04
COL8A2P25067 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
COL8A2P25067 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
COL8A2P25067 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 AC062016.1-201ENST00000355719 319 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 RNU5B-1-201ENST00000363286 116 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 SNORA7.2-201ENST00000364446 145 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 RNU6-335P-201ENST00000364563 113 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 MIR525-201ENST00000384978 85 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 AL360182.1-201ENST00000397433 468 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.33□□□□□ -2.04
COL8A2P25067 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.33□□□□□ -2.04
COL8A2P25067 MIR1250-201ENST00000408098 113 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 SNORA11.2-201ENST00000408318 127 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.33□□□□□ -2.04
COL8A2P25067 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL8A2P25067 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.33□□□□□ -2.04
COL8A2P25067 MTCYBP24-201ENST00000420387 1106 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 AC246680.2-201ENST00000422106 389 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 PTP4A1P7-201ENST00000423476 514 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.33□□□□□ -2.04
COL8A2P25067 AC104332.2-201ENST00000429959 156 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 AL590103.1-201ENST00000434488 307 ntBASIC2.33□□□□□ -2.04
COL8A2P25067 HMGB1P12-201ENST00000438594 598 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms