Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC004825.2-201ENST00000616634 455 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC026585.1-201ENST00000619582 524 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL5A2P05997 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A2P05997 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A2P05997 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A2P05997 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.63□□□□□ -1.83
COL5A2P05997 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COL5A2P05997 RLIMP2-201ENST00000427891 1563 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.62□□□□□ -1.83
COL5A2P05997 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL5A2P05997 RN7SKP44-201ENST00000363602 316 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 Y_RNA.436-201ENST00000384097 102 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 SNORD65C-201ENST00000390962 71 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 USP9YP26-201ENST00000421008 661 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 C1DP1-201ENST00000426049 402 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 RWDD4P2-201ENST00000426392 563 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 RPP40P1-201ENST00000426762 456 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 HSFY3P-201ENST00000444242 1191 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.62□□□□□ -1.83
COL5A2P05997 AL157827.1-201ENST00000447622 132 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 GTF2IP12-201ENST00000456547 356 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AP002884.2-201ENST00000471647 395 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.62□□□□□ -1.83
COL5A2P05997 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 RNU6-1308P-201ENST00000516817 103 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.62□□□□□ -1.83
COL5A2P05997 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.62□□□□□ -1.83
COL5A2P05997 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.62□□□□□ -1.83
COL5A2P05997 AL365503.1-201ENST00000605247 905 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.62□□□□□ -1.83
COL5A2P05997 AC073569.3-201ENST00000619055 682 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AL158163.2-201ENST00000619110 700 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AL121895.2-201ENST00000619558 447 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
COL5A2P05997 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 AC095050.2-201ENST00000510748 1458 ntBASIC3.62□□□□□ -1.83
COL5A2P05997 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 DDX43P2-201ENST00000604753 1354 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 RNA5SP289-201ENST00000362332 137 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 RNA5SP27-201ENST00000363839 119 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 RNU6-932P-201ENST00000391108 106 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.61□□□□□ -1.83
COL5A2P05997 AC003685.2-201ENST00000422795 395 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AL049610.1-201ENST00000423374 372 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 OR2AS1P-201ENST00000427827 319 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 USP9YP28-201ENST00000435142 589 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 UBE2D3P1-201ENST00000436669 444 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AL513043.1-201ENST00000439124 535 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.61□□□□□ -1.83
COL5A2P05997 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.61□□□□□ -1.83
COL5A2P05997 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 TPTE2P5-203ENST00000458118 728 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AC078817.1-201ENST00000492623 435 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.61□□□□□ -1.83
COL5A2P05997 AC026414.1-201ENST00000504046 698 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 RN7SKP34-201ENST00000516142 244 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 FAM60DP-201ENST00000524174 632 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 MTND2P26-201ENST00000528255 1029 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.61□□□□□ -1.83
COL5A2P05997 AC109446.2-201ENST00000567872 497 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AC013468.1-201ENST00000608680 598 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AL138478.1-201ENST00000612252 832 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.61□□□□□ -1.83
COL5A2P05997 AC092608.3-201ENST00000625017 386 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.61□□□□□ -1.83
COL5A2P05997 MAPK10-362ENST00000641864 4484 ntBASIC3.61□□□□□ -1.83
COL5A2P05997 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL5A2P05997 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A2P05997 U3.11-201ENST00000364476 212 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 SNORD116.1-201ENST00000365628 92 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A2P05997 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 RNU6-244P-201ENST00000391028 104 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 AC127526.1-201ENST00000417526 366 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A2P05997 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A2P05997 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A2P05997 AL008629.1-201ENST00000438615 184 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 CBX1P4-201ENST00000439415 457 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A2P05997 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.6□□□□□ -1.83
COL5A2P05997 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.6□□□□□ -1.83
COL5A2P05997 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL5A2P05997 AC025459.1-201ENST00000504072 156 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A2P05997 MRPS33P3-201ENST00000513456 322 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 AC096725.1-201ENST00000514266 313 ntBASIC3.6□□□□□ -1.83
COL5A2P05997 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.6□□□□□ -1.83
COL5A2P05997 RN7SKP283-201ENST00000517197 270 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms