Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
COL1A1P02452 CCNB2P1-201ENST00000399411 1150 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 SNORA11.4-201ENST00000408823 129 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.62□□□□□ -1.99
COL1A1P02452 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.62□□□□□ -1.99
COL1A1P02452 RPL21P103-201ENST00000479921 488 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 ATG10-AS1-201ENST00000504846 648 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 AC116337.1-201ENST00000509680 687 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 OR5H4P-201ENST00000510851 923 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.62□□□□□ -1.99
COL1A1P02452 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.62□□□□□ -1.99
COL1A1P02452 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.62□□□□□ -1.99
COL1A1P02452 AC103710.1-201ENST00000610003 901 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 AC006378.2-201ENST00000623178 2476 ntBASIC2.62□□□□□ -1.99
COL1A1P02452 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.62□□□□□ -1.99
COL1A1P02452 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
COL1A1P02452 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A1P02452 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
COL1A1P02452 PRELID3BP11-201ENST00000414230 479 ntBASIC2.61□□□□□ -1.99
COL1A1P02452 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A1P02452 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A1P02452 AC004263.1-201ENST00000479327 332 ntBASIC2.61□□□□□ -1.99
COL1A1P02452 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
COL1A1P02452 AL356266.1-201ENST00000623311 483 ntBASIC2.61□□□□□ -1.99
COL1A1P02452 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
COL1A1P02452 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A1P02452 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A1P02452 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A1P02452 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
COL1A1P02452 AC011460.1-201ENST00000636268 1834 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A1P02452 AL118520.1-201ENST00000450770 291 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 MTCYBP14-201ENST00000457471 715 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 CCNHP1-201ENST00000513311 678 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.6□□□□□ -1.99
COL1A1P02452 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.6□□□□□ -1.99
COL1A1P02452 OR5D17P-201ENST00000531492 978 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.6□□□□□ -1.99
COL1A1P02452 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A1P02452 AC084373.1-201ENST00000603311 235 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 MIR6845-201ENST00000613182 61 ntBASIC2.6□□□□□ -1.99
COL1A1P02452 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.6□□□□□ -1.99
COL1A1P02452 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.59□□□□□ -1.99
COL1A1P02452 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -1.99
COL1A1P02452 AL356292.1-201ENST00000283110 373 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 MTND4P13-201ENST00000402078 1023 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 U3.37-201ENST00000408528 213 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.59□□□□□ -1.99
COL1A1P02452 AC244033.1-201ENST00000426826 870 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.59□□□□□ -1.99
COL1A1P02452 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
COL1A1P02452 AC093716.1-201ENST00000435923 377 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.59□□□□□ -1.99
COL1A1P02452 AC117522.2-201ENST00000510049 657 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 RN7SKP82-201ENST00000516786 223 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 RNU6-295P-201ENST00000516901 104 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.59□□□□□ -1.99
COL1A1P02452 AC023043.2-201ENST00000589678 1026 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 AC011468.4-201ENST00000603942 409 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 RNA5SP108-201ENST00000605921 117 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 AL359198.2-201ENST00000611836 194 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 AP003072.4-201ENST00000624580 310 ntBASIC2.59□□□□□ -1.99
COL1A1P02452 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.59□□□□□ -2
COL1A1P02452 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -2
COL1A1P02452 AC007256.1-201ENST00000392253 2765 ntBASIC2.59□□□□□ -2
COL1A1P02452 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL1A1P02452 SNORA31-201ENST00000362607 130 ntBASIC2.58□□□□□ -2
COL1A1P02452 RNU6-697P-201ENST00000363348 107 ntBASIC2.58□□□□□ -2
COL1A1P02452 MIR7-2-201ENST00000384970 110 ntBASIC2.58□□□□□ -2
COL1A1P02452 SNORA48.3-201ENST00000391081 134 ntBASIC2.58□□□□□ -2
COL1A1P02452 SNORA26.9-201ENST00000391322 122 ntBASIC2.58□□□□□ -2
COL1A1P02452 RNU6-1140P-201ENST00000410517 106 ntBASIC2.58□□□□□ -2
COL1A1P02452 MTCYBP7-201ENST00000419540 1134 ntBASIC2.58□□□□□ -2
COL1A1P02452 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.58□□□□□ -2
COL1A1P02452 MTCYBP31-201ENST00000438855 1122 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.58□□□□□ -2
COL1A1P02452 HMGN2P21-201ENST00000447764 270 ntBASIC2.58□□□□□ -2
COL1A1P02452 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.58□□□□□ -2
COL1A1P02452 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.58□□□□□ -2
COL1A1P02452 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.58□□□□□ -2
COL1A1P02452 AL022099.1-201ENST00000604551 712 ntBASIC2.58□□□□□ -2
COL1A1P02452 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 CU459211.1-201ENST00000635667 749 ntBASIC2.58□□□□□ -2
COL1A1P02452 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL1A1P02452 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL1A1P02452 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL1A1P02452 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
COL1A1P02452 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.58□□□□□ -2
COL1A1P02452 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL1A1P02452 TRIAP1P1-201ENST00000427062 225 ntBASIC2.58□□□□□ -2
COL1A1P02452 NEK4P1-201ENST00000433383 879 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC007677.1-201ENST00000445757 515 ntBASIC2.58□□□□□ -2
COL1A1P02452 HMGB1P48-201ENST00000446155 598 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 AC027673.1-201ENST00000456245 405 ntBASIC2.58□□□□□ -2
COL1A1P02452 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms