Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MIR1183-201ENST00000408856 89 ntBASIC4.22□□□□□ -1.73
DDX58O95786 RNU2-37P-201ENST00000410695 177 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC092447.6-201ENST00000414578 210 ntBASIC4.22□□□□□ -1.73
DDX58O95786 RPS24P7-201ENST00000416921 246 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC002075.2-201ENST00000425207 252 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX58O95786 HMGB1P15-201ENST00000453854 435 ntBASIC4.22□□□□□ -1.73
DDX58O95786 SUMO2P2-201ENST00000456482 255 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX58O95786 HSPA8P13-201ENST00000523715 472 ntBASIC4.22□□□□□ -1.73
DDX58O95786 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX58O95786 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX58O95786 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX58O95786 MIR5680-201ENST00000577577 84 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX58O95786 YPEL5P2-201ENST00000605553 359 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC107952.2-201ENST00000606048 486 ntBASIC4.22□□□□□ -1.73
DDX58O95786 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX58O95786 AP000484.1-201ENST00000620067 1252 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC091953.5-201ENST00000622919 233 ntBASIC4.22□□□□□ -1.73
DDX58O95786 CRYM-AS1-204ENST00000637983 556 ntBASIC4.22□□□□□ -1.73
DDX58O95786 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 GABPAP-201ENST00000419271 1356 ntBASIC4.22□□□□□ -1.73
DDX58O95786 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX58O95786 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.21□□□□□ -1.73
DDX58O95786 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
DDX58O95786 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX58O95786 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX58O95786 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 FAM133CP-201ENST00000332869 704 ntBASIC4.21□□□□□ -1.74
DDX58O95786 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
DDX58O95786 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX58O95786 AL031679.1-201ENST00000400616 525 ntBASIC4.21□□□□□ -1.74
DDX58O95786 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.21□□□□□ -1.74
DDX58O95786 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX58O95786 AC091862.1-201ENST00000438016 1100 ntBASIC4.21□□□□□ -1.74
DDX58O95786 MUPP-201ENST00000438111 566 ntBASIC4.21□□□□□ -1.74
DDX58O95786 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX58O95786 TRGVB-201ENST00000453257 471 ntBASIC4.21□□□□□ -1.74
DDX58O95786 RPS4XP2-201ENST00000458402 793 ntBASIC4.21□□□□□ -1.74
DDX58O95786 snoU13.4-201ENST00000458916 104 ntBASIC4.21□□□□□ -1.74
DDX58O95786 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 RPL7P18-201ENST00000478965 734 ntBASIC4.21□□□□□ -1.74
DDX58O95786 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 COX7A2P2-201ENST00000505291 250 ntBASIC4.21□□□□□ -1.74
DDX58O95786 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
DDX58O95786 AC034244.1-201ENST00000507687 207 ntBASIC4.21□□□□□ -1.74
DDX58O95786 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.21□□□□□ -1.74
DDX58O95786 AC010587.2-201ENST00000511727 448 ntBASIC4.21□□□□□ -1.74
DDX58O95786 RN7SKP244-201ENST00000516513 307 ntBASIC4.21□□□□□ -1.74
DDX58O95786 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX58O95786 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX58O95786 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX58O95786 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX58O95786 HIGD1AP1-201ENST00000550979 275 ntBASIC4.21□□□□□ -1.74
DDX58O95786 TUSC7.1-201ENST00000610969 165 ntBASIC4.21□□□□□ -1.74
DDX58O95786 AC025588.4-201ENST00000615802 908 ntBASIC4.21□□□□□ -1.74
DDX58O95786 SNORD39.4-201ENST00000620099 78 ntBASIC4.21□□□□□ -1.74
DDX58O95786 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.21□□□□□ -1.74
DDX58O95786 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
DDX58O95786 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX58O95786 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
DDX58O95786 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX58O95786 PWAR6-201ENST00000552334 4618 ntBASIC4.2□□□□□ -1.74
DDX58O95786 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
DDX58O95786 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.2□□□□□ -1.74
DDX58O95786 AP000776.1-201ENST00000530032 1663 ntBASIC4.2□□□□□ -1.74
DDX58O95786 AL049780.3-201ENST00000624612 1583 ntBASIC4.2□□□□□ -1.74
DDX58O95786 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
DDX58O95786 RNU4-28P-201ENST00000364739 141 ntBASIC4.2□□□□□ -1.74
DDX58O95786 RNU6-1074P-201ENST00000383995 104 ntBASIC4.2□□□□□ -1.74
DDX58O95786 RNU6-83P-201ENST00000384568 112 ntBASIC4.2□□□□□ -1.74
DDX58O95786 MIR483-201ENST00000385070 76 ntBASIC4.2□□□□□ -1.74
DDX58O95786 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX58O95786 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX58O95786 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX58O95786 RPL23AP82-202ENST00000427528 469 ntBASIC4.2□□□□□ -1.74
DDX58O95786 AL590233.1-201ENST00000430017 456 ntBASIC4.2□□□□□ -1.74
DDX58O95786 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.2□□□□□ -1.74
DDX58O95786 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX58O95786 ATP5C1P1-201ENST00000441945 895 ntBASIC4.2□□□□□ -1.74
DDX58O95786 Z75741.1-201ENST00000446793 314 ntBASIC4.2□□□□□ -1.74
DDX58O95786 MTND2P19-201ENST00000449129 1012 ntBASIC4.2□□□□□ -1.74
DDX58O95786 RPS24P6-201ENST00000452670 400 ntBASIC4.2□□□□□ -1.74
DDX58O95786 AC097493.1-201ENST00000463958 372 ntBASIC4.2□□□□□ -1.74
DDX58O95786 CENPBD1P1-201ENST00000464061 469 ntBASIC4.2□□□□□ -1.74
DDX58O95786 HMGB1P25-201ENST00000468402 607 ntBASIC4.2□□□□□ -1.74
DDX58O95786 AC023424.2-201ENST00000493479 777 ntBASIC4.2□□□□□ -1.74
DDX58O95786 RPL7P47-201ENST00000497299 556 ntBASIC4.2□□□□□ -1.74
DDX58O95786 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.2□□□□□ -1.74
DDX58O95786 RNU5A-4P-201ENST00000516588 111 ntBASIC4.2□□□□□ -1.74
DDX58O95786 RN7SKP57-201ENST00000517248 293 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms