Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC087588.1-201ENST00000462203 316 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 VN1R17P-201ENST00000472048 1090 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SL41P-201ENST00000476144 297 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RNA5SP497-201ENST00000516081 97 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 MYL12AP1-201ENST00000518490 515 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RPA2P1-201ENST00000556557 721 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 BNIP3P30-201ENST00000601184 574 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR6793-201ENST00000612376 63 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC034102.8-201ENST00000615146 484 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 MAPK10-303ENST00000641324 3959 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC008568.2-201ENST00000623862 2313 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU6-867P-201ENST00000364956 107 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU6-190P-201ENST00000384154 102 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 SNORA51.9-201ENST00000384295 124 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR93-201ENST00000385024 80 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR431-201ENST00000385266 114 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 MT-TL1-201ENST00000386347 75 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SKP146-201ENST00000410242 334 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU4-46P-201ENST00000410818 138 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SKP167-201ENST00000411047 285 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 CRYBB2P1-203ENST00000415709 538 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 OR2AM1P-201ENST00000422137 422 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 NDUFB4P7-201ENST00000423198 363 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 BX323845.3-201ENST00000428215 527 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 MTND4P25-201ENST00000441039 533 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AL034369.1-201ENST00000453808 477 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 TREML3P-201ENST00000457327 501 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 SCARNA10-201ENST00000459255 330 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RPL23AP11-201ENST00000475260 469 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU4-29P-201ENST00000515943 174 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SKP35-201ENST00000517210 151 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AP004607.5-201ENST00000532034 217 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC209154.1-201ENST00000582156 337 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AL078624.2-201ENST00000605063 554 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AC012409.4-201ENST00000612923 249 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 AL118522.2-201ENST00000616045 615 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 RIOK3P1-201ENST00000418778 1528 ntBASIC6.59□□□□□ -1.35
GTF3C3Q9Y5Q9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
GTF3C3Q9Y5Q9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.36
GTF3C3Q9Y5Q9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RNU6-552P-201ENST00000362869 119 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 Y_RNA.157-201ENST00000363638 102 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RNA5SP90-201ENST00000364801 99 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 Y_RNA.390-201ENST00000383932 102 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 MIR513A2-201ENST00000385249 127 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL606923.1-201ENST00000406616 190 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RNU6-193P-201ENST00000410977 107 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC004552.1-201ENST00000419089 348 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC104339.1-201ENST00000465478 348 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RPS26P3-201ENST00000470205 348 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC090543.2-201ENST00000483963 348 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC004057.1-201ENST00000485827 348 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC092436.1-201ENST00000506450 503 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC025465.4-201ENST00000513422 638 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 RNA5SP154-201ENST00000516193 111 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AP001804.3-201ENST00000525146 880 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC022832.1-201ENST00000530718 645 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 MRPS21P7-201ENST00000566937 238 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC024267.2-201ENST00000582737 417 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC011487.3-201ENST00000593607 453 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL138889.2-201ENST00000603883 242 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL158032.1-201ENST00000605401 106 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AL713922.2-201ENST00000619384 716 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 AC233309.1-201ENST00000619522 751 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms