Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 OR2AS2P-201ENST00000606902 342 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AC106028.5-201ENST00000610332 395 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL590282.1-201ENST00000610379 1136 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL450472.3-201ENST00000615578 367 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 MIR6075-201ENST00000620782 95 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AL031601.2-202ENST00000622650 282 ntBASIC1.98□□□□□ -2.09
AP4S1Q9Y587 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
AP4S1Q9Y587 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RNA5SP68-201ENST00000363885 119 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RNU6-629P-201ENST00000384061 103 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 MIR196B-201ENST00000384852 84 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 MIR627-201ENST00000384979 97 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RNU4-65P-201ENST00000410473 140 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RPL7P49-201ENST00000471402 708 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RN7SL636P-201ENST00000497504 294 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AC008565.1-201ENST00000509046 885 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.97□□□□□ -2.09
AP4S1Q9Y587 RNA5SP148-201ENST00000516527 94 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 GTF3AP2-201ENST00000557014 266 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AC012182.1-201ENST00000570133 895 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 AC007620.3-201ENST00000608131 497 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 MIR6817-201ENST00000615588 66 ntBASIC1.97□□□□□ -2.09
AP4S1Q9Y587 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 MTCYBP7-201ENST00000419540 1134 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 RPL7P37-201ENST00000425095 738 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 SNRPEP4-201ENST00000435815 279 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AC107083.1-201ENST00000439643 279 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 HMGB1P15-201ENST00000453854 435 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 GAPDHP39-201ENST00000481866 979 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 RN7SKP277-201ENST00000516895 283 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.96□□□□□ -2.1
AP4S1Q9Y587 RPS3AP23-202ENST00000574601 686 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AC009090.3-201ENST00000616553 565 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 AL731566.2-201ENST00000618971 317 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 KPNA2P1-201ENST00000458289 1591 ntBASIC1.96□□□□□ -2.1
AP4S1Q9Y587 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AL137014.1-201ENST00000420490 1226 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 UBE2D3P2-201ENST00000424409 445 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 UBE2V1P6-201ENST00000430840 422 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 USP9YP8-201ENST00000441913 500 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 MTCYBP14-201ENST00000457471 715 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC096571.1-202ENST00000506634 735 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 VN1R92P-201ENST00000598511 928 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 AC245517.5-201ENST00000611529 162 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
AP4S1Q9Y587 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
AP4S1Q9Y587 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 DNAJC19P6-201ENST00000401853 280 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 CBWD4P-201ENST00000445695 655 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC104978.1-201ENST00000449387 391 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 RPS3P1-201ENST00000456781 192 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AL031183.1-201ENST00000457667 207 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 RAC1P5-201ENST00000512182 576 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 OR5AQ1P-201ENST00000527596 927 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC090616.3-201ENST00000582184 217 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC022069.1-201ENST00000582910 658 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AL451007.1-201ENST00000595491 289 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC084373.1-201ENST00000603311 235 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC009220.3-201ENST00000604318 586 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 AC106791.2-201ENST00000604680 391 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 SNORA35B-201ENST00000607417 129 ntBASIC1.94□□□□□ -2.1
AP4S1Q9Y587 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
AP4S1Q9Y587 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms